Gene Ava_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1914 
Symbol 
ID3681691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2376788 
End bp2377417 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID637717255 
Product3'-5' exonuclease 
Protein accessionYP_322431 
Protein GI75908135 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.194823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAC AAGATTTCCA AGTTGGCGAT CGCGACCTTA GTGACGCTGC TGTTGACCAA 
TATTTACAAT CAGAGGCGAT CGCTGTCGAT ACAGAAACGA TGGGATTGTT ACCCCAGCGC
GATCGCCTGT GCTTAATTCA ACTATGCAAC CCAGAGGGTA AGGTAACTGC AATCCGTATA
GCCAGAGGGC AAACCGCAGC GCCTAATCTC AAAAAACTCC TAGAAGCAAC AAACGTCCTC
AAAGTTTTCC ACTTCGCTCG GTTTGATGTG GCTACCTTGC GTCACCATCT GGATATTCAT
GTCCAGCCAA TTTTCTGCAC CAAAATCGCC AGTAAGTTAG CCCGCACTTA CACCAATCGC
CACGGACTTA AAGATTTGGT GTATGAGTTG GAACAAGTAG AACTAGATAA AAGCGCTCAA
AGTTCGGATT GGGGAAACGC TGCAAATTTA ACTGACGCAC AACTCAGTTA CGCCGCCAAT
GATGTCCGCT ATTTACTCAG CGCCCAGCAA AAGTTAGTCG CCATGCTCAA ACGCGAAGAA
CGCTGGGAAC TAGCACAACA ATGCTTTCAA GTCCTACCAA CAATTGTTTC TCTAGATTTA
TTACAGTTCA AGGATTTGTT TGAACATTAA
 
Protein sequence
MTLQDFQVGD RDLSDAAVDQ YLQSEAIAVD TETMGLLPQR DRLCLIQLCN PEGKVTAIRI 
ARGQTAAPNL KKLLEATNVL KVFHFARFDV ATLRHHLDIH VQPIFCTKIA SKLARTYTNR
HGLKDLVYEL EQVELDKSAQ SSDWGNAANL TDAQLSYAAN DVRYLLSAQQ KLVAMLKREE
RWELAQQCFQ VLPTIVSLDL LQFKDLFEH