Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1902 |
Symbol | |
ID | 3681776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2362322 |
End bp | 2363191 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637717243 |
Product | phosphate ABC transporter permease |
Protein accession | YP_322419 |
Protein GI | 75908123 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
TIGRFAM ID | [TIGR00972] phosphate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.462595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00664679 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAATTT TCACAAAAAA CTCAGTTCCT CTTAGAGCAA GAGTAGAAAC TATGTCAGCC TTTTCTTTGC CATCTGTAAA TCCTTCTAGA GCAGATAGCG AAGTTATTTT ACATGCAAAG GTAGAGGCAT TTTATTATGA TAGATTTTTG GCCTTACGTA ATGTTTACCT TCCTATCTAC AAAAACCTAA TTACAACTTT AATTGGACCT TCTGGCTGTG GTAAAAGCAC ATTACTCCGG TGTTTTAATC GTCTCAATGA TCTTATTCCC CAAACTCGCT TACAAGGGCA AATTATTTTT AAAGGACGCA ATATTTATCA TCCTCTAGAA GATGCCGTAG TTCTACGCCG CAACATTGGG ATGGTCTTCC AAAAGCCAAA TCCCTTTCCA AAATCTATCT ATAATAATGT TGCCTTTGGT CTCCGCATTC AGGGATATCG AGGAGATATA GATGAAATCG TTGAGCATTC ATTACGTCAG GCTATCCTTT GGGATGAGGT CAAGAATAAA CTTAAAGAAA ATGCTCTATC TCTTTCTGGT GGTCAGCAAC AAAGGTTGTG TATCGCGCGA ATGCTGGCTG TACAACCAGA GATAATTCTT ATGGATGAAC CTTGCTCTGC TCTTGATCCA ACATCAACCA AGCAAATTGA AGCATTAATA AAAGAAATTA AGCAACAACA TACTATTGTG ATTGTTACCC ATAATATGCA ACAGGCTTCA CGAATCTCTG ATATGACTGC ATTTTTCAAT ACTGAAATGA TAGAAGGAAG CCGTACTGGT GAATTAGTCG AATATGATCA CACACCTGTA ATTTTTCAAA ATCCAACAAG AGAAATTACT CGGCAATATG TGAATGGTTA TTTCGGTTGA
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Protein sequence | MTIFTKNSVP LRARVETMSA FSLPSVNPSR ADSEVILHAK VEAFYYDRFL ALRNVYLPIY KNLITTLIGP SGCGKSTLLR CFNRLNDLIP QTRLQGQIIF KGRNIYHPLE DAVVLRRNIG MVFQKPNPFP KSIYNNVAFG LRIQGYRGDI DEIVEHSLRQ AILWDEVKNK LKENALSLSG GQQQRLCIAR MLAVQPEIIL MDEPCSALDP TSTKQIEALI KEIKQQHTIV IVTHNMQQAS RISDMTAFFN TEMIEGSRTG ELVEYDHTPV IFQNPTREIT RQYVNGYFG
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