Gene Ava_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1902 
Symbol 
ID3681776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2362322 
End bp2363191 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content37% 
IMG OID637717243 
Productphosphate ABC transporter permease 
Protein accessionYP_322419 
Protein GI75908123 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.462595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00664679 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAATTT TCACAAAAAA CTCAGTTCCT CTTAGAGCAA GAGTAGAAAC TATGTCAGCC 
TTTTCTTTGC CATCTGTAAA TCCTTCTAGA GCAGATAGCG AAGTTATTTT ACATGCAAAG
GTAGAGGCAT TTTATTATGA TAGATTTTTG GCCTTACGTA ATGTTTACCT TCCTATCTAC
AAAAACCTAA TTACAACTTT AATTGGACCT TCTGGCTGTG GTAAAAGCAC ATTACTCCGG
TGTTTTAATC GTCTCAATGA TCTTATTCCC CAAACTCGCT TACAAGGGCA AATTATTTTT
AAAGGACGCA ATATTTATCA TCCTCTAGAA GATGCCGTAG TTCTACGCCG CAACATTGGG
ATGGTCTTCC AAAAGCCAAA TCCCTTTCCA AAATCTATCT ATAATAATGT TGCCTTTGGT
CTCCGCATTC AGGGATATCG AGGAGATATA GATGAAATCG TTGAGCATTC ATTACGTCAG
GCTATCCTTT GGGATGAGGT CAAGAATAAA CTTAAAGAAA ATGCTCTATC TCTTTCTGGT
GGTCAGCAAC AAAGGTTGTG TATCGCGCGA ATGCTGGCTG TACAACCAGA GATAATTCTT
ATGGATGAAC CTTGCTCTGC TCTTGATCCA ACATCAACCA AGCAAATTGA AGCATTAATA
AAAGAAATTA AGCAACAACA TACTATTGTG ATTGTTACCC ATAATATGCA ACAGGCTTCA
CGAATCTCTG ATATGACTGC ATTTTTCAAT ACTGAAATGA TAGAAGGAAG CCGTACTGGT
GAATTAGTCG AATATGATCA CACACCTGTA ATTTTTCAAA ATCCAACAAG AGAAATTACT
CGGCAATATG TGAATGGTTA TTTCGGTTGA
 
Protein sequence
MTIFTKNSVP LRARVETMSA FSLPSVNPSR ADSEVILHAK VEAFYYDRFL ALRNVYLPIY 
KNLITTLIGP SGCGKSTLLR CFNRLNDLIP QTRLQGQIIF KGRNIYHPLE DAVVLRRNIG
MVFQKPNPFP KSIYNNVAFG LRIQGYRGDI DEIVEHSLRQ AILWDEVKNK LKENALSLSG
GQQQRLCIAR MLAVQPEIIL MDEPCSALDP TSTKQIEALI KEIKQQHTIV IVTHNMQQAS
RISDMTAFFN TEMIEGSRTG ELVEYDHTPV IFQNPTREIT RQYVNGYFG