Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1889 |
Symbol | |
ID | 3681802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2345615 |
End bp | 2346073 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717230 |
Product | signal transduction protein |
Protein accession | YP_322406 |
Protein GI | 75908110 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.617772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAA CCGTTGCCGA TGTAATGAGT CACAACCCAG TTGTTGTCAA GCCAGAAACG CCGCTACAAG AAGCTATCAA GATTCTGGCA GAACGACGCA TCAGTGGTTT ACCTGTTGTG GATAATGACG GTAAATTGTT GGGCATTATC TCAGAGACTG ATCTGATGTG GCAAGAAACT GGTGTGACTC CTCCTGCGTA CATCATGTTT TTAGATAGTG TCATCTATTT ACAGAATCCT GCTGTTTATG AACGCGATTT GCATAAGGCT TTAGGACAGA CTGTGGGCGA AGTGATGAGT AAAAATCCTG TTACCGTTTC CCCTGAAAAG TCTGTGAAAC AAGCTGCTCA ATTGATGCAC GATCGCAATG TTCACCGTCT ACCAGTACTA GATGATGCGG GTCAAGTGAT TGGCATCCTC ACCCGTGGTG ATATTATCCG AGCAATGGCT AATAGTTAG
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Protein sequence | MPKTVADVMS HNPVVVKPET PLQEAIKILA ERRISGLPVV DNDGKLLGII SETDLMWQET GVTPPAYIMF LDSVIYLQNP AVYERDLHKA LGQTVGEVMS KNPVTVSPEK SVKQAAQLMH DRNVHRLPVL DDAGQVIGIL TRGDIIRAMA NS
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