Gene Ava_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1889 
Symbol 
ID3681802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2345615 
End bp2346073 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content45% 
IMG OID637717230 
Productsignal transduction protein 
Protein accessionYP_322406 
Protein GI75908110 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.617772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAA CCGTTGCCGA TGTAATGAGT CACAACCCAG TTGTTGTCAA GCCAGAAACG 
CCGCTACAAG AAGCTATCAA GATTCTGGCA GAACGACGCA TCAGTGGTTT ACCTGTTGTG
GATAATGACG GTAAATTGTT GGGCATTATC TCAGAGACTG ATCTGATGTG GCAAGAAACT
GGTGTGACTC CTCCTGCGTA CATCATGTTT TTAGATAGTG TCATCTATTT ACAGAATCCT
GCTGTTTATG AACGCGATTT GCATAAGGCT TTAGGACAGA CTGTGGGCGA AGTGATGAGT
AAAAATCCTG TTACCGTTTC CCCTGAAAAG TCTGTGAAAC AAGCTGCTCA ATTGATGCAC
GATCGCAATG TTCACCGTCT ACCAGTACTA GATGATGCGG GTCAAGTGAT TGGCATCCTC
ACCCGTGGTG ATATTATCCG AGCAATGGCT AATAGTTAG
 
Protein sequence
MPKTVADVMS HNPVVVKPET PLQEAIKILA ERRISGLPVV DNDGKLLGII SETDLMWQET 
GVTPPAYIMF LDSVIYLQNP AVYERDLHKA LGQTVGEVMS KNPVTVSPEK SVKQAAQLMH
DRNVHRLPVL DDAGQVIGIL TRGDIIRAMA NS