Gene Ava_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1878 
Symbol 
ID3681791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2330572 
End bp2331300 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content43% 
IMG OID637717219 
Producttwo component transcriptional regulator 
Protein accessionYP_322395 
Protein GI75908099 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.559477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAGTC ATAAAGAAAA AATCCTGGTA GTAGACGACG AAGCTAGCAT TCGCCGAATT 
TTAGAAACGC GCCTTTCAAT GATTGGCTAC GATGTAGTAA CAGCAGGGGA TGGCGAAGAA
GCTTTAGAAA CATTCCGCAA ATCTGACCCT GATTTAGTGG TTTTGGATGT GATGATGCCA
AAGCTGGATG GTTATGGTGT TTGTCAAGAA TTACGTAAAG AATCGGATGT CCCTATAATT
ATGCTAACAG CCTTAGGGGA CGTTGCCGAT CGCATCACTG GTTTAGAGTT AGGTGCTGAT
GACTACGTAG TTAAACCGTT TTCCCCCAAA GAACTAGAAG CAAGAATTCG CTCAGTATTA
CGACGGGTAG ATAAAACTGG TGCTTCTGGT ATTCCCAGTT CTGGGGTAAT TCACGTTGGT
AATATCAAAA TTGATACCAA CAAGCGCCAA GTCTATAAAG GCGATGAGCG TATCCGCTTG
ACAGGTATGG AATTTAGTTT ACTAGAGTTG CTAGTCAGCC GTTCTGGAGA AGCTTTTTCC
CGTTCGGAAA TTTTACAAGA AGTCTGGGGT TATACTCCAG AACGCCATGT AGACACCCGT
GTGGTAGATG TGCATATCTC CCGCTTACGG GCAAAATTAG AAGATGACCC CAGTAACCCA
GAATTAATTC TCACAGCACG GGGTACTGGT TATTTGTTTC AACGCATAAT TGAGCCAGGA
GAAGAATAG
 
Protein sequence
MESHKEKILV VDDEASIRRI LETRLSMIGY DVVTAGDGEE ALETFRKSDP DLVVLDVMMP 
KLDGYGVCQE LRKESDVPII MLTALGDVAD RITGLELGAD DYVVKPFSPK ELEARIRSVL
RRVDKTGASG IPSSGVIHVG NIKIDTNKRQ VYKGDERIRL TGMEFSLLEL LVSRSGEAFS
RSEILQEVWG YTPERHVDTR VVDVHISRLR AKLEDDPSNP ELILTARGTG YLFQRIIEPG
EE