Gene Ava_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1790 
Symbol 
ID3682074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2234336 
End bp2234914 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content39% 
IMG OID637717130 
Producthypothetical protein 
Protein accessionYP_322307 
Protein GI75908011 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTT TAACATTACA GTTACCGCCT CATCTTAAAT TTACGGATGA GGAATTTGAA 
CAAATTGTGG CTGTAAATCA AGAGTTGCGT TTGGAATTAA CTGCGGAAGG GGAATTGGTC
ATTATGTCAC CCACTGGGGG GGAAACAGGA AACCGTAATT TTGATTTGTT GGGTCAACTA
TGGTTGTGGA ACAGTCAGAA TAATTTAGGC AAAGCTTTTG ATTCTTCCAC TGGTTTTAAA
CTTCCCAATG GTGCAACTCG TTCTCCTGAT GCTTCTTGGG TCAAGATGGA AAGATGGGAT
ATTCTCACTC CACAACAAAG GAAAAAATAT CTTCCCTTGT GTCCAGATTT TGCAGTGGAG
TTGGTTTCGG AAACTGATGA TGTAGAAGAT ACTCAAGCCA AAATGCTGGA ATATTTAGCA
AATGGTTTAC AGCTTGGTTG GTTAATTCAC CCCAAAGATA AACTAGTGAT AATTTATCGT
CCTTATCAAG CAGCAGAGGT ATTACAGTCT CCTACAAGTT TATCCGGGGA AAATGTTCTT
CCTGGTTTTA TTTTAAATTT ACAGCCCATT TTTGCATAG
 
Protein sequence
MTALTLQLPP HLKFTDEEFE QIVAVNQELR LELTAEGELV IMSPTGGETG NRNFDLLGQL 
WLWNSQNNLG KAFDSSTGFK LPNGATRSPD ASWVKMERWD ILTPQQRKKY LPLCPDFAVE
LVSETDDVED TQAKMLEYLA NGLQLGWLIH PKDKLVIIYR PYQAAEVLQS PTSLSGENVL
PGFILNLQPI FA