Gene Ava_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1766 
Symbol 
ID3682109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2200771 
End bp2201874 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content48% 
IMG OID637717106 
Productthreonine-phosphate decarboxylase 
Protein accessionYP_322283 
Protein GI75907987 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAAC CAGATCACGG GGGAAATTTA GCTTGGGCAG CAGCGTTGGC TGGCTGTCCT 
GCGGATGCGA TTGTAGATTT TTCTGCTAGC ATCAGCCCGT TGGGGCCGCC TCAAAGTGCG
ATCGCTGCTA TTCAGTCACA AATTAGTAAT CTCAGGCACT ATCCAGATCC TGATTACAGT
GAACTGAGAC TGGCTCTAGG TCATTTCCAT CAATTACCTT TAGAGTGGAT TCTGCCGGGC
AATGGTTCAG CAGAATTACT TACTCTCGCA GGTAGGGAAT TAGCTCAATT AGCCGCAACA
GTTTTAATAA CTCCAGCCTT TGGCGATTAC TACCGCACCT TAAGGGCGTA CCACGCTAGA
GTACTGGAGT TTCCCCTTGT TAGTGTTGAG TCACGAGTAT TGGGTACAGA ATGTCACTTA
ACGCAACTTC ACACCCAGCA CTCAGGACTC AGCACTAACT ATGCTTTGTT ACTCAACAAT
CCCCACAACC CAACAGGCAA GCTATTCACA AGAGAGGCGA TTTTACCTCT GCTGGAACAA
TTTGCTTTGG TGGTGGTGGA TGAAGCATTT ATGGATTTTG TCCCTCCTGA TGAGGAACAA
AGCCTGATTC CAGTGGTGGC AGAATATCCT AACCTAGTGA TATTGCGATC GCTGACAAAA
TTCTACAGTC TCCCAGGGCT GAGATTAGGA TATGCGATCG CTCACCCTGA TCGTCTGCAA
AAATGGCAAT TATGGCGTGA CCCCTGGCCT GTCAATACTT TGGCGGCGGC GGCGGCGATA
GCTGCCCTTG AGGATCGAGA ATTCCAAGTA CAAACTTGGC AATGGCTACC ACCTGCAAGA
GAGGAACTAT TCCAAGGCCT AACCGCCATT CCAGGATTAA CACCCCAAGC CAGTGCTGCT
AACTTCTTGC TAGTGGAAAC ACAACAATCG AGTTTAGAAT TACAGCAAAA ATTACTCCAG
CAGCACCAGA TTTTAATCCG TGATTGTCTT AGCTTTAAAG AACTAGGCGA TCGTTTTTTC
CGCCTCGCCG TCCGTTCTCA CACCGACAAT CAACGCTTAA CAAAAGCACT AAAGACAATA
GCCCAAAACT CTCTTGACCA CTGA
 
Protein sequence
MRQPDHGGNL AWAAALAGCP ADAIVDFSAS ISPLGPPQSA IAAIQSQISN LRHYPDPDYS 
ELRLALGHFH QLPLEWILPG NGSAELLTLA GRELAQLAAT VLITPAFGDY YRTLRAYHAR
VLEFPLVSVE SRVLGTECHL TQLHTQHSGL STNYALLLNN PHNPTGKLFT REAILPLLEQ
FALVVVDEAF MDFVPPDEEQ SLIPVVAEYP NLVILRSLTK FYSLPGLRLG YAIAHPDRLQ
KWQLWRDPWP VNTLAAAAAI AALEDREFQV QTWQWLPPAR EELFQGLTAI PGLTPQASAA
NFLLVETQQS SLELQQKLLQ QHQILIRDCL SFKELGDRFF RLAVRSHTDN QRLTKALKTI
AQNSLDH