Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1752 |
Symbol | |
ID | 3682134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2186597 |
End bp | 2187412 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637717092 |
Product | HAD family hydrolase |
Protein accession | YP_322269 |
Protein GI | 75907973 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00695054 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC TACTCGTATT AGACATAGAT GGCACCATTT CGGGAGAGTC GAACGCCGTC AGCCCATATG TTAAGGAAGC GATCGCCGCA GTTCAAGCCA GAGGTATTCC CGTGGCGATC GCTACCGGCA GGATGTATCG TTCGGCACTC CGCTTTCATC AAGATATTAA CTCTACTTTG CCCCTAGCCG CTTATCAAGG AGCCTGGATT CAAGACCCAT CTGACCAAAA AATCCATCAA CATCTACCTG TAGATAGAAA GACGGCTGAA CAATTATTAG ATTATTTTGA ACAGCCACAG TGGCGATCGC TTTTATCTAT CCACTTCTAC ATTAATGATC AGCTCTACGT GCGCGAAGTC ACCCAAGAGA CTGCAACTTA CGCACAACGT TCTGGTATTA CCCCCATTGC GGTAGGTGAT TTGCGCCAAA CTTTAACTAA TGCACCCACA AAAATTTTAG CCTTGTGCGA TGACACAGAG GTAATCAACA ACCTCTTGGG CAGTTTGCGC CTACAATACA CACCAGCTGA ACTTTATCTC ACCACATCCG TCGCCACTTT CTTTGAAGCA ACTAATCCCT TTGTCAACAA AGGCAATGCT GTGCGCTACC TAGCCGAAGA ATTGCTGGGA ATACAAAGCC ACGAGGTTAT GTGCATTGGT GATAACTTCA ATGATCTGGA AATGCTGGAA TACGCCGGTA TTGGGATCGC TATGGGGAAC GCCCCCACAG GAGTACAGGC GATCGCTCAA TGGGTAGCCC CCACTGTCGA AGAGGATGGA GCTGCTGTCG CAATTGAGAA ATTTCTACTT TCGTAA
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Protein sequence | MIKLLVLDID GTISGESNAV SPYVKEAIAA VQARGIPVAI ATGRMYRSAL RFHQDINSTL PLAAYQGAWI QDPSDQKIHQ HLPVDRKTAE QLLDYFEQPQ WRSLLSIHFY INDQLYVREV TQETATYAQR SGITPIAVGD LRQTLTNAPT KILALCDDTE VINNLLGSLR LQYTPAELYL TTSVATFFEA TNPFVNKGNA VRYLAEELLG IQSHEVMCIG DNFNDLEMLE YAGIGIAMGN APTGVQAIAQ WVAPTVEEDG AAVAIEKFLL S
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