Gene Ava_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1752 
Symbol 
ID3682134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2186597 
End bp2187412 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID637717092 
ProductHAD family hydrolase 
Protein accessionYP_322269 
Protein GI75907973 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00695054 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC TACTCGTATT AGACATAGAT GGCACCATTT CGGGAGAGTC GAACGCCGTC 
AGCCCATATG TTAAGGAAGC GATCGCCGCA GTTCAAGCCA GAGGTATTCC CGTGGCGATC
GCTACCGGCA GGATGTATCG TTCGGCACTC CGCTTTCATC AAGATATTAA CTCTACTTTG
CCCCTAGCCG CTTATCAAGG AGCCTGGATT CAAGACCCAT CTGACCAAAA AATCCATCAA
CATCTACCTG TAGATAGAAA GACGGCTGAA CAATTATTAG ATTATTTTGA ACAGCCACAG
TGGCGATCGC TTTTATCTAT CCACTTCTAC ATTAATGATC AGCTCTACGT GCGCGAAGTC
ACCCAAGAGA CTGCAACTTA CGCACAACGT TCTGGTATTA CCCCCATTGC GGTAGGTGAT
TTGCGCCAAA CTTTAACTAA TGCACCCACA AAAATTTTAG CCTTGTGCGA TGACACAGAG
GTAATCAACA ACCTCTTGGG CAGTTTGCGC CTACAATACA CACCAGCTGA ACTTTATCTC
ACCACATCCG TCGCCACTTT CTTTGAAGCA ACTAATCCCT TTGTCAACAA AGGCAATGCT
GTGCGCTACC TAGCCGAAGA ATTGCTGGGA ATACAAAGCC ACGAGGTTAT GTGCATTGGT
GATAACTTCA ATGATCTGGA AATGCTGGAA TACGCCGGTA TTGGGATCGC TATGGGGAAC
GCCCCCACAG GAGTACAGGC GATCGCTCAA TGGGTAGCCC CCACTGTCGA AGAGGATGGA
GCTGCTGTCG CAATTGAGAA ATTTCTACTT TCGTAA
 
Protein sequence
MIKLLVLDID GTISGESNAV SPYVKEAIAA VQARGIPVAI ATGRMYRSAL RFHQDINSTL 
PLAAYQGAWI QDPSDQKIHQ HLPVDRKTAE QLLDYFEQPQ WRSLLSIHFY INDQLYVREV
TQETATYAQR SGITPIAVGD LRQTLTNAPT KILALCDDTE VINNLLGSLR LQYTPAELYL
TTSVATFFEA TNPFVNKGNA VRYLAEELLG IQSHEVMCIG DNFNDLEMLE YAGIGIAMGN
APTGVQAIAQ WVAPTVEEDG AAVAIEKFLL S