Gene Ava_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1742 
Symbol 
ID3682124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2174527 
End bp2175207 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content36% 
IMG OID637717082 
Producthypothetical protein 
Protein accessionYP_322259 
Protein GI75907963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0344715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAA AATTAGGGTT CGGCTCTATC CCCAAGCCTC AATATGTTTT TGTTAGTAAA 
GAACATGATC ACTGTTGGTA TACGCTTTCA GATGATACAA AGCCAATTCC CATTTATGAC
AAAGCTTTGA CAGGCTTAAT TACAGGAATT GAAATTGATA AAAAAGTTGA AACTTCTCAT
GGAGAAAAGG AAAAAACTGA CTTACATATT TTGGCAGATA AGCCGTATGT TGTACGTTCG
GGAAGCGAAT CTTACTTTGC TAAAAGTTTG TTACTTTCAC TTGATGTTTT GACCTGCGAG
CAATTGCGTC ACCCTCTAAC CATTGCTGTT AGTCCTGGGG ATAAAACAAT TGTATTTTGT
ACAATCTATA ACCCACTAAC TTACCGTGCT GTAGGTGTTA GCTGGGATGG ACATAAAGAA
ACAGATTGGC AAGCTTTAGG GCAGAAAGTT AGTCTAAAAA TTAATAATAT TCAAAATGTT
AATCAAGATT TTACTTCATC TAAGCATCGT GAAGGTTTTA TCGCTCAAAC TGATACATAT
TTATCTCAAT TAAATTGGAG TCCAGAGCAG GGAAGAGAAT TTTTACAGCA AAAGTATGGC
AAGCGATCGC GCTATCAACT TTCTGAAACA GAACTGCTAG ATTTTATCAA TTATCTCAAG
CTACAACTAA CCGCCAATTG A
 
Protein sequence
MNVKLGFGSI PKPQYVFVSK EHDHCWYTLS DDTKPIPIYD KALTGLITGI EIDKKVETSH 
GEKEKTDLHI LADKPYVVRS GSESYFAKSL LLSLDVLTCE QLRHPLTIAV SPGDKTIVFC
TIYNPLTYRA VGVSWDGHKE TDWQALGQKV SLKINNIQNV NQDFTSSKHR EGFIAQTDTY
LSQLNWSPEQ GREFLQQKYG KRSRYQLSET ELLDFINYLK LQLTAN