| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1678 |
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| Symbol | |
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| ID | 3682234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2104388 |
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| End bp | 2105110 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637717017 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_322195 |
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| Protein GI | 75907899 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCAA AAACATATAG ATTCATCGTA CCAAGCTGCT TAGGAATTTC AACCATACTG
ATGTTACTAA ACACAGGTGT AAATCAAAAA GCGATCGCCA ATACTTCCTC ACAGAATATA
TCTCCGGTAA TCGTTTCCCA GGCTCAAACA ACGACTGACC CGTTGGTAGA ACTGGGCATT
ACAAGGCAAG AACTCGAAAA AGCTCTTGCT GAATCCGATG AAGCGATTAA GCTCAATCCT
AATGATGTAG ATGCTTATTT AGGTCGGGCA ATGATTCGTC ATTTCTCAAA AGACTACGCA
GGTGCAATTT CTGATTACGA GCAAGCTATC AAACTCCGAC CACGACCAAA GGACGTTTCT
GTATATTCCA ATAGCGGCAA AGCTCACGCT GAATTAGGCG ACCACAAAAG TGCGATCGCA
AAATATAACA CAGCCCTCAA AATCGATCCA AATGGAGTTT TTAGTTTATT TATCTACAAT
GATAGGGGTC TTTCCTATCT GGCTTTAGGG GATACTAAAA GTGCGATCGC AGACTTTAAT
CAAGCAATTC AACTCGCTCC TGAATCCGCA GACTCCTACT ATAATCGAGG TCTTGCTCAA
CGTCGTTTAG GTCAAAAGCA AGCCGCTATT GCTGATTTTC AAAAAGCAGC AAAATTCTAT
CAAGCAAATA ACAAAACTGA GGAATATAAA AGGACTTTGA AGCAATTAGA AGAGCTTCAG
TAA
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| Protein sequence | MIPKTYRFIV PSCLGISTIL MLLNTGVNQK AIANTSSQNI SPVIVSQAQT TTDPLVELGI
TRQELEKALA ESDEAIKLNP NDVDAYLGRA MIRHFSKDYA GAISDYEQAI KLRPRPKDVS
VYSNSGKAHA ELGDHKSAIA KYNTALKIDP NGVFSLFIYN DRGLSYLALG DTKSAIADFN
QAIQLAPESA DSYYNRGLAQ RRLGQKQAAI ADFQKAAKFY QANNKTEEYK RTLKQLEELQ
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