Gene Ava_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1664 
Symbol 
ID3682220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2088705 
End bp2089298 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content33% 
IMG OID637717004 
Producthypothetical protein 
Protein accessionYP_322182 
Protein GI75907886 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value4.8435e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.115526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTC AAATCTTAAA TAAAAACACC ACTATTTCAG AACAGAGATT TCTCCTACCA 
GGTCATTATA CCTGGGAAGA ATTAGAGACA ATAGAAACTT TAACCGCAGA TGCAGCAGGT
TTGCGAATAA CTTATCTTGA TGGGTGCATT GAATTTATGA CTCTTGGTGA ACAACACGAA
ATGATTAAAA CCATTCTGGG TTTTTTACTA GAATTATACT CTTGTGAAAT AGGTATCAAT
CTTATTCCAG TAGGTAGTGC TACGCGACGG GCAAAAGAAA AAAGTGCATC CTTTGAACCT
GATGAATCTT ATTACATCGG AGAAAAAAAA GAAAATCCCG ACTTAGCAAT TGAAGTCAAT
ATTACCAGTG GCAGTATTGA TAAACTAGAA AAATACAAGC GGTTCAATAT TACTGAAGTT
TGGTTTTGGG AAAACAATCA ATTACTATTA TATCATCTCA AAAATGAGAA TTATGAGCAA
ATCGCTCAAA GTGAATTATT CCCGAATTTA GATATAGAAT TATTGGTAAG CTGTGTTTTA
ATGCCTTCAA TTATTGATGC AAGAAAACAA TTTTTACAAG AGATGAGTCA ATAA
 
Protein sequence
MTLQILNKNT TISEQRFLLP GHYTWEELET IETLTADAAG LRITYLDGCI EFMTLGEQHE 
MIKTILGFLL ELYSCEIGIN LIPVGSATRR AKEKSASFEP DESYYIGEKK ENPDLAIEVN
ITSGSIDKLE KYKRFNITEV WFWENNQLLL YHLKNENYEQ IAQSELFPNL DIELLVSCVL
MPSIIDARKQ FLQEMSQ