Gene Ava_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1607 
Symbol 
ID3679164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1984735 
End bp1985898 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content45% 
IMG OID637716947 
Producthypothetical protein 
Protein accessionYP_322125 
Protein GI75907829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.6937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTA ACCCCACTGT ATTCACCTTT GCTGACTCGA CAGACCTGAT TCTAGAAATC 
CCTGACTCCA CAACAGCAAA TCTTGACAGC CAGTTATTTT CTCATCCTTA TTCACGTTAT
CAAGCTTATC TCAACGAACT TTGCCTGAGT GCGGTCTTGC CGTGGTTACA GGAAGACTTT
TCCACACAGG CAAAGGTGTG GCCATCCGCC ACAACTCTAG CCAGTCTTTG GGAACTAGTG
AACGGAACAG CAGTCACAAT TGACGGCAAG AGATTTATTT TGGTTCCCAG TGAAAATATT
GATCACAGCG AATTACGTGT ACAGCAGGAA TGGGTAGATT TACCAACTTG GGCTGGGGAT
TATTATTTAG CAGTGCAAGT AGATGGGGAA TATGTAAAAG TTTGGGGCTA TTGTACCCAC
ACGCAACTGA AGCATCAAGG TAAATATGAT CCAGGCGATC GCACCTATTC TTTAGACATA
ACTGATATTG TTAACGATAT AAGTGTGTTA GCTGTAGCGC GGGATTTATG CCCTGATGAA
ATTACCCGTA CGGCGATCGC CCCATTACCA ACCATACCCC AAGAACAAGC CCAAAATCTC
ATCACCCGTT TAAGCAATCC CGAAATTATT AACCCCCGGC TAGCCATCCC TTTTCAACTA
TGGGGCGCAT TAATTGAACA CGGCGGCTGG CGACAAAGCT TATATGAACG TCGTTTGGGA
CTACCAGAAC AAAGATCAGT GCTGCAATGG TTACAAAGTG GTGTGTCTCA AGTAGCACAG
ACTATGGGTT GGGGACGCTT GAATTTACAA TTAAGTGCGG CTGGGGCTAG GAGTGTAGAA
GAGAGACAAA CAGGTGTCAC CCTATCACGT CGATTAACCA TTGCTGGTCA ACTATACGAA
CTGTTGATTA CACCACAAGG TGAACCAGAC GCACCTTATT GGCGTTTTGA ATTACGGAAT
GCAGCCGTAG GCGCAGTCAT TCCCGGTGGC TTTAAACTCC GACTCCTCAC AGAAGACCTA
CAGTCATTTC CCAACAATGA AGACATCGCC ACAAATGCAG TAGAACAACT CTACGTTGAA
GTTGCCCTAG AGGCTGGAGA AGGCATAGTA TGGGAAATTG AGCCACTACC GGAAAATTAT
GACCGAGAAA TTCTCAAATT TTAA
 
Protein sequence
MTANPTVFTF ADSTDLILEI PDSTTANLDS QLFSHPYSRY QAYLNELCLS AVLPWLQEDF 
STQAKVWPSA TTLASLWELV NGTAVTIDGK RFILVPSENI DHSELRVQQE WVDLPTWAGD
YYLAVQVDGE YVKVWGYCTH TQLKHQGKYD PGDRTYSLDI TDIVNDISVL AVARDLCPDE
ITRTAIAPLP TIPQEQAQNL ITRLSNPEII NPRLAIPFQL WGALIEHGGW RQSLYERRLG
LPEQRSVLQW LQSGVSQVAQ TMGWGRLNLQ LSAAGARSVE ERQTGVTLSR RLTIAGQLYE
LLITPQGEPD APYWRFELRN AAVGAVIPGG FKLRLLTEDL QSFPNNEDIA TNAVEQLYVE
VALEAGEGIV WEIEPLPENY DREILKF