Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1600 |
Symbol | |
ID | 3679157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1975316 |
End bp | 1976113 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716940 |
Product | ABC transporter-like |
Protein accession | YP_322118 |
Protein GI | 75907822 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0157688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATTG CGAACTTTTC CTTAGCAACT AATTCCATGC GGGAACCAGT GGATACATCA ACAGCAACAG CAACAATTAA TATCTCCCAT CTAGGGGTAC ACTACCGTAC ACAAGAAGCC TTGCGGGATG TTAACTGTAT TGTCAAACCG GGACGAATAA CAGGAATATT TGGCCCTAAC GGTGCTGGTA AAAGCACTCT GATGAAAGCA ATGTTAGGCT TGGTTCCCGT TAGCAGTGGT AAGGTATTAT ACCAAGAAAA ACCCCTGATG CAGCAATTGG GGAAAGTTGC TTACGTTCCC CAACGTAGCC AAATTGACTG GACTTATCCC GCCGTAGTTT GGGATGTGGT GATGATGGGA CGGGTAAAGA AAACAGGTTG GTTACGTAGT TTCTCGGCTG TGAGTCGCCA AGTTGCCAAG AATGCCTTAG AACGAGTGGG AATGTTGGAT TATTGCGATC GCCCCATAGG ACAATTATCA GGGGGACAAC AACAACGGGT ATTTTTAGCG AGGGCTTTAG CACAACAAGC AGACATATTC TGTTTTGATG AACCCTTGGT AGGTATCGAC CAAAAAACCC AAACAGTTAT TTTTGAGGTT TTCCATGAAC TAGCTGCGGC TAACAAAATT GTGTTGGTAG TTAACCACGA TTTAGGCGAA TCCATCAGCC ATTTCGATGA TTTAGTATTA CTCAACCGTG AATTAATCGC CGCAGGTTCC CGCCAACAAG TACTTACAGA GGATAACCTG CACCAAGCTT ACGGCGGTAA AGTCATCTAT TTCTCGGATG CAGCTTGA
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Protein sequence | MQIANFSLAT NSMREPVDTS TATATINISH LGVHYRTQEA LRDVNCIVKP GRITGIFGPN GAGKSTLMKA MLGLVPVSSG KVLYQEKPLM QQLGKVAYVP QRSQIDWTYP AVVWDVVMMG RVKKTGWLRS FSAVSRQVAK NALERVGMLD YCDRPIGQLS GGQQQRVFLA RALAQQADIF CFDEPLVGID QKTQTVIFEV FHELAAANKI VLVVNHDLGE SISHFDDLVL LNRELIAAGS RQQVLTEDNL HQAYGGKVIY FSDAA
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