Gene Ava_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1597 
Symbol 
ID3678723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1971884 
End bp1972966 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content50% 
IMG OID637716937 
Productphotosystem II reaction centre protein PsbA/D1 
Protein accessionYP_322115 
Protein GI75907819 
COG category 
COG ID 
TIGRFAM ID[TIGR01151] photosystem II, DI subunit (also called Q(B)) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.96706e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA CCTTACAACA GCGCAAAAGC GCCAACGTAT GGGAACAGTT CTGCGAGTGG 
ATTACCAGCA CCAACAACCG CCTATACATA GGTTGGTTCG GTGTACTCAT GATCCCCACC
TTGCTAGCTG CAACCACCTG CTTCATCATC GCCTTTATCG CCGCACCTCC AGTAGACATC
GACGGTATCC GTGAACCAGT AGCAGGTTCC TTAATCTACG GAAACAACAT CATCTCCGGT
GCAGTTGTTC CCTCCTCCAA CGCCATCGGC TTGCACTTCT ACCCAATTTG GGAAGCAGCA
TCTCTTGACG AGTGGTTGTA CAACGGTGGT CCTTACCAAT TGGTAATCTT CCACTTCTTG
ACCGGCGTAT TCTGCTACCT CGGTCGTGAG TGGGAACTAT CCTACCGCTT AGGAATGCGT
CCTTGGATCT GCCTAGCATT CTCCGCTCCC GTAGCAGCAG CAACAGCAGT ATTCTTGATC
TACCCAATCG GACAAGGTTC CTTCTCTGAC GGTATGCCCT TGGGTATCTC CGGCACCTTC
AACTTCATGA TCGTGTTCCA AGCAGAACAC AACATCTTGA TGCACCCCTT CCACATGTTA
GGTGTAGCAG GTGTATTCGG TGGTAGCTTG TTCTCCGCAA TGCACGGTTC CTTGGTAACT
TCCTCCTTAG TTCGTGAAAC AACCGAAAAC GAATCACAAA ACTACGGTTA CAAATTCGGT
CAAGAAGAAG AAACCTACAA CATCGTTGCA GCACACGGCT ACTTCGGTCG CTTGATCTTC
CAATACGCTT CCTTCAACAA CAGCCGTCAA TTGCACTTCT TCCTAGCTGC ATGGCCTGTA
ATCGGTATTT GGTTTACCGC GTTGGGTGTA AGCACAATGG CGTTCAACTT GAACGGCTTC
AACTTCAACC AATCCATCAT CGACTCACAA GGTCGTGTAA TCAATACCTG GGCTGACATC
ATCAACCGCG CTAACTTGGG TATGGAAGTA ATGCACGAGC GTAACGCTCA CAACTTCCCC
TTAGACTTGG CTGCTGGTGA AGTTGCTCCT GTTGCTTTAA CCGCTCCTGC TATCAACGGT
TAA
 
Protein sequence
MTATLQQRKS ANVWEQFCEW ITSTNNRLYI GWFGVLMIPT LLAATTCFII AFIAAPPVDI 
DGIREPVAGS LIYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PYQLVIFHFL
TGVFCYLGRE WELSYRLGMR PWICLAFSAP VAAATAVFLI YPIGQGSFSD GMPLGISGTF
NFMIVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTEN ESQNYGYKFG
QEEETYNIVA AHGYFGRLIF QYASFNNSRQ LHFFLAAWPV IGIWFTALGV STMAFNLNGF
NFNQSIIDSQ GRVINTWADI INRANLGMEV MHERNAHNFP LDLAAGEVAP VALTAPAING