Gene Ava_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1586 
SymbolobgE 
ID3678712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1957703 
End bp1958731 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content45% 
IMG OID637716926 
ProductGTPase ObgE 
Protein accessionYP_322104 
Protein GI75907808 
COG category[R] General function prediction only 
COG ID[COG0536] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0414808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTA TCGACCAAGC ACAAATCGAA GTAGAAGCTG GTAAAGGTGG CGATGGTATC 
GTCGCTTTCC GGCGTGAAAA ATATGTACCT GCTGGTGGGC CTTCTGGTGG AAATGGCGGA
CGTGGTGGTT CAGTCGTTTT CGTGGCAGTA GAAAATCTGC AAACCCTGTT AGACTTCCGA
TATAAGCATA TATTTAAAGC AGACGATGGA GGTCGTGGCG GCCCCAATAA CTGTACCGGC
GCTTCGGGAA AAGATTTAAT TGTTCAAGTT CCCTGTGGAA CCACTATTTA TGATGCGGAA
ACAGGTGATT TACTTGGTGA TTTAACTCAA CCTAACCAAC AACTACTTAT TGCAGCAGGT
GGTAAAGGTG GTTTAGGAAA TCAATACTTC TTGAGTAACC GTAACCGCGC CCCAGAATAC
TCTCTTCCAG GATTACCAGG GGAAAGAAAA CTACTCCGTT TAGAATTGAA ATTATTGGCG
GAAGTAGGAA TTATCGGTTT ACCCAACGCA GGTAAATCAA CATTGATATC ATCTTTATCG
GCGGCGCGTC CGAAAATTGC TGACTATCCC TTTACAACCC TCATCCCCAA CTTGGGTGTA
GTACGCAAAC CCACAGGAGA TGGAACAGTA TTTGCCGATA TCCCTGGCTT AATTGAAGGT
GCAGCCGATG GTGCAGGATT AGGGCATGAC TTTTTACGTC ACATTGAAAG AACGCGGGTA
CTCCTGCACT TAATTGATGC TACCAGCGAT GATGTTATCA GAGACTACAA CACAATTGAG
CAGGAATTGC AAGCTTACGG ACGGGGTTTA AGTGAGCGAA TGCAGATTGT AGCCTTGAAT
AAAATTGATG CAGTTGATAG GGAAACTGTA GACTTAGATG CACTAGCCAC CCAATTAAAT
CATCTTTCTC ACGCCCCAGT TTTCCTAATT TCTGCGGTAA CTCGCACCGG CTTAGAACCA
ATGTTACAAG AAGTTTGGGG AATTCTTGAC CAAGTAAATG CTCTTGAGGA AGCAGAAGTT
TTTCGCTAA
 
Protein sequence
MQFIDQAQIE VEAGKGGDGI VAFRREKYVP AGGPSGGNGG RGGSVVFVAV ENLQTLLDFR 
YKHIFKADDG GRGGPNNCTG ASGKDLIVQV PCGTTIYDAE TGDLLGDLTQ PNQQLLIAAG
GKGGLGNQYF LSNRNRAPEY SLPGLPGERK LLRLELKLLA EVGIIGLPNA GKSTLISSLS
AARPKIADYP FTTLIPNLGV VRKPTGDGTV FADIPGLIEG AADGAGLGHD FLRHIERTRV
LLHLIDATSD DVIRDYNTIE QELQAYGRGL SERMQIVALN KIDAVDRETV DLDALATQLN
HLSHAPVFLI SAVTRTGLEP MLQEVWGILD QVNALEEAEV FR