| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1583 |
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| Symbol | |
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| ID | 3678709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1954349 |
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| End bp | 1955431 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716923 |
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| Product | photosystem II reaction centre protein PsbA/D1 |
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| Protein accession | YP_322101 |
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| Protein GI | 75907805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000169219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC TTTTAGAACA GCGTAGTAGC GCTAATTTAT GGCATAGATT CGGTAACTGG
ATTACCAGTA CGGAAAATCG AATGTATGTT GGTTGGTTTG GAGTACTGTT AATTCCCACA
GCCTTAACTG CGGCGATTGT CTTTATCCTT GCGTTTATTG CCGCGCCACC AGTTGACGTG
GATGGCATTC GTGAACCAGT ATCAGGTTCT CTGCTCTACG GTAATAACAT TATTACTGCT
ACTGTAGTAC CAACTTCAGC CGCTATTGGC CTGCACTTAT ACCCTATATG GGAAGCGGCT
TCTTTAGACG AATGGCTGTA CAATGGCGGC CCTTACCAAA TGATTGTCCT GCATTTCCTG
ATTGCCATCT ATGCTTATAT GGGTCGGCAA TGGGAACTGA GTTATCGCTT AGGGATGCGT
CCGTGGATTC CTGTAGCTTT TTCTGCTCCC GTTGCGGCCG CAACAGCCGT GCTGTTGATT
TATCCCATTG GGCAAGGCAG TTTTTCCGAT GGGATGATGC TGGGTATTTC TGGCACATTC
AACTTTATGA TTGTGTTTTC ACCGGAACAT AATATTCTCA TGCACCCATT TCACATGATT
GGTGTAGCTG GAGTCTTTGG TGGGGCATTA TTCTCGGCAA TGCACGGTTC CTTGGTGACA
TCTACACTAG TGCGGGAAAC CTCAGAAGTA GAATCAGCCA ATACTGGCTA TAAGTTTGGT
CAAGAAGAGG AAACCTACAA TATCGTAGCT GCACATGGTT ACTTTGGGCG GTTAATCTTC
CAATATGCCA GCTTTAACAA CTCCCGTTCT TTGCATTTCT TCCTAGCAGC TTGGCCGGTA
ATTGGTATCT GGTTTGCGGC TTTGGGTATC AGCACCATGT CCTTTAACTT GAATGGGTTT
AACTTCAATA ACTCAATTTT GGATCACCAA GGACGGACAA TTGACACTTG GGCAGACCTG
CTTAACAGAG CCAACTTAGG GATTGAAGTG ATGCACGAGC GAAATGCTCA CAACTTCCCG
CTAGATTTAG CGTCTGGTGA AGTTCAACCA ATTGCTTTGG CTGCTCCAGC GATCGCTAGT
TAG
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| Protein sequence | MTTLLEQRSS ANLWHRFGNW ITSTENRMYV GWFGVLLIPT ALTAAIVFIL AFIAAPPVDV
DGIREPVSGS LLYGNNIITA TVVPTSAAIG LHLYPIWEAA SLDEWLYNGG PYQMIVLHFL
IAIYAYMGRQ WELSYRLGMR PWIPVAFSAP VAAATAVLLI YPIGQGSFSD GMMLGISGTF
NFMIVFSPEH NILMHPFHMI GVAGVFGGAL FSAMHGSLVT STLVRETSEV ESANTGYKFG
QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV IGIWFAALGI STMSFNLNGF
NFNNSILDHQ GRTIDTWADL LNRANLGIEV MHERNAHNFP LDLASGEVQP IALAAPAIAS
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