Gene Ava_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1565 
Symbol 
ID3681108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1931740 
End bp1932156 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content34% 
IMG OID637716905 
Productputative anti-sigma regulatory factor (Ser/Thr protein kinase) 
Protein accessionYP_322083 
Protein GI75907787 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.33449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCATA AAATCTATTT AAAATTAAAT ACGGACTTGT CAGCCTCGGC TAAGGTGTTG 
TCGTGGTTCG AGCAGATAAA TCAACCAGTT ATTTCTCATA AGCAAATCTG GTGGCAATGT
CAAACATTAC TAATGGAGGG ATTTGTTAAT ATTGTTGAAC ATTCACACAA ACATTTACCA
ATAGAAACAC CTATTGAGAT AGAAGTTTCA CGAACACAGG ATTATATAGA AATACGTATA
TGGTCTCAAG GTGAACCCTT TGACTTAGAA CAGCGATTAA AAAAAACAAC TGAACTGGAA
AAAAATATTC AAGAGCGCGG TCGCGGTTTA AAAATTATGG AAGCGATCGC CGATGATTTA
AGTTATGAAA AACTAGCAGA TAATCGTTAC TGTTTATTGA TTCGTAAGCA TTATTAA
 
Protein sequence
MNHKIYLKLN TDLSASAKVL SWFEQINQPV ISHKQIWWQC QTLLMEGFVN IVEHSHKHLP 
IETPIEIEVS RTQDYIEIRI WSQGEPFDLE QRLKKTTELE KNIQERGRGL KIMEAIADDL
SYEKLADNRY CLLIRKHY