Gene Ava_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1526 
Symbol 
ID3682297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1875084 
End bp1876277 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content38% 
IMG OID637716866 
Productglycosyl transferase, group 1 
Protein accessionYP_322044 
Protein GI75907748 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00489758 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.775583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT TGAGTATCGC TTATATTACT TTCGATATTG TACCAGCACC AAAAGGGGCA 
TCAATTCATA TTGAGGCTTT TTCTTCGGCT TTAGCAGATG TTTATAAGGA AATACATTTA
TTAACAGTTT CACCAACGGT GGGATTAATA GAATCAGACC AAATCCATTT AAATATTAAA
CAAGTAATGT TACCTGCTGT GGGTAATGAT TTCATTCAGC GAGTTTTGTA CTTCCGTCGA
GAATTACAAG GTTGGTTAAA TAACCGACGA TTTGATGTGA TACATATTCG CTCAATTTAT
GAAGGTTTGA TAATTGCTTG TAATAAAAAG CAATATTGTG ACCAGATGAT CTTTGAAGTG
AATGGGTTAC CTTCGATTGA GTTAAAATAT CGCTATCCGG CTGTAGCTAA TGATGATGAC
CTACTCTATA AGCTATATTC CCAAGAGCAA ATTTGTTTAG ATGCAGCAGA TTTGATTGTA
ACTCCTAGTA ATGTGACTGC TAAATATTTA CAAGGAAGGG GAATATCAGA GAATAAAATT
AAAGTTATTC CTAATGGCGT AGATTTAGAC ATATTTATTT GTAAAAATAC TCGGCAGTTA
AACATCAATG TAGGTCATTT ACCTTACCAG ATGCTATATT TTGGGACGCT TTCACCTTGG
CAAGGGGTAA ATTTAGCAGT TGAAGCCTTA GGGTTATTGA ATCGAGATTT TCCTGCTTGT
TTGACAGTGA TAGGACAAGG GAGAAATCAT CAGATAAAAA CTTTAAAACA GCTAGCTTAC
AAACTGGGTG TGGCAGATAA ACTGAATATT TTAGAACCCA TGTCCCAAAA AGATTTGGTT
GCACATATTC ATAGTTCGGA TGTAATTTTA GCGCCTTTAG CGGCAAACGA TCGCAATCTC
GTCCAAGGTT GTTGTCCCCT AAAGATTTTG GAAGGTATGG CGACGGGAAC ACCTGTAATT
ACTAGTGATA TACCAGTCGT GCAGGAGTTG GGAGAAAACG GAGTTCATTT CTTATCAGTC
AAGCCGGGTT CGGCAAAGGC AATTAAGGAT GCTGTATTAC AGTTAAGAAA TGATGGGGAG
TTAGGGAGTC AACTAGCTGC TAATGCCCGT CAACGCATTG AAGAGTATTA TACTTGGCAA
GGCGCGGGTA AGGAGTTAAT TGCGGCTTAT CAGGAATTAC TGACTATTGA CTAA
 
Protein sequence
MNKLSIAYIT FDIVPAPKGA SIHIEAFSSA LADVYKEIHL LTVSPTVGLI ESDQIHLNIK 
QVMLPAVGND FIQRVLYFRR ELQGWLNNRR FDVIHIRSIY EGLIIACNKK QYCDQMIFEV
NGLPSIELKY RYPAVANDDD LLYKLYSQEQ ICLDAADLIV TPSNVTAKYL QGRGISENKI
KVIPNGVDLD IFICKNTRQL NINVGHLPYQ MLYFGTLSPW QGVNLAVEAL GLLNRDFPAC
LTVIGQGRNH QIKTLKQLAY KLGVADKLNI LEPMSQKDLV AHIHSSDVIL APLAANDRNL
VQGCCPLKIL EGMATGTPVI TSDIPVVQEL GENGVHFLSV KPGSAKAIKD AVLQLRNDGE
LGSQLAANAR QRIEEYYTWQ GAGKELIAAY QELLTID