Gene Ava_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1505 
Symbol 
ID3682471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1852432 
End bp1853463 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content45% 
IMG OID637716845 
Product30S ribosomal protein S1 
Protein accessionYP_322023 
Protein GI75907727 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.0832e-13 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATC AGAATTTAAC CGCTACAGAA ATTGGATTCA CTCACGAAGA TTTCGCTGCC 
CTACTTGACA AATACGACTA TCACTTTAGC CCAGGAGATG TCGTACCAGG TACAGTTTTT
AGTATAGAAC CGCGCGGCGC TCTGATTGAC ATAGGTGCTA AAACAGCAGC TTATATACCT
ATACAAGAAA TGTCTATAAA CCGGGTCGAT GCCCCGGAAG AAGTTTTACA ATCAAACGAA
ACAAGAGAAT TTTTCATCCT CACCGATGAA AACGAAGATG GACAGTTAAC CCTTTCCATC
CGCAGAATTG AGTATATGCG TGCTTGGGAG CGAGTACGCC AGTTACAAGC AGAAGATGCT
ACAGTGCGCT CTGGTGTATT TGCCACCAAT CGTGGGGGGG CGTTGGTCAG AATTGAAGGA
CTACGGGGCT TTATTCCTGG TTCTCACATC AGCACCCGCA AACCCAAAGA AGAATTAGTA
GGCGAAGAAC TGCCTTTAAA ATTCCTAGAA GTAGACGAAG AACGTAACCG CTTAGTTCTC
TCTCACCGTC GTGCGTTAGT TGAACGCAAG ATGAACCGCC TAGAAGTGGG CGAAGTCGTC
ATCGGTACAG TACGTGGTAT CAAACCCTAC GGTGCATTCA TCGACATCGG TGGTGTTAGC
GGCTTGCTGC ACATCTCGGA AATTTCTCAC GAGCATATCG ATACACCTCA CAGTGTATTT
AACGTCAATG ATGAAGTGAA AGTGATGATC ATTGACTTGG ATGCAGAAAG AGGTAGAATA
TCTCTCTCTA CTAAACAGCT GGAACCAGAA CCCGGTGACA TGATTAAAAA CCGTGATTTG
GTTTACGATA AAGCCGAAGA AATGGCAGCT AAGTATAGAG AACAACTGCT GGCTAAACAA
CAAGGTATCG CCTTACCCGC AGAAGGCGCA GAAGATTTGA TTGAGGAAGA AATTCCCTCT
GCAACTGAAG ATGCTGTAGC TGAAGAAGAA ATTTCAGCAG TTGAGGAAAT CCCAGCAGCT
ATTGAAGACT AA
 
Protein sequence
MVNQNLTATE IGFTHEDFAA LLDKYDYHFS PGDVVPGTVF SIEPRGALID IGAKTAAYIP 
IQEMSINRVD APEEVLQSNE TREFFILTDE NEDGQLTLSI RRIEYMRAWE RVRQLQAEDA
TVRSGVFATN RGGALVRIEG LRGFIPGSHI STRKPKEELV GEELPLKFLE VDEERNRLVL
SHRRALVERK MNRLEVGEVV IGTVRGIKPY GAFIDIGGVS GLLHISEISH EHIDTPHSVF
NVNDEVKVMI IDLDAERGRI SLSTKQLEPE PGDMIKNRDL VYDKAEEMAA KYREQLLAKQ
QGIALPAEGA EDLIEEEIPS ATEDAVAEEE ISAVEEIPAA IED