Gene Ava_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1479 
Symbol 
ID3682522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1824112 
End bp1825152 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content49% 
IMG OID637716818 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_321997 
Protein GI75907701 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.98571e-11 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTG TTTTAGCAAT CGAAACTAGC TGTGATGAAA CTGCCGTGGC AATTGTTAAC 
AATCGTCAAG TTTGCAGCAG TATCATAGCT TCACAAATTC CAGTCCACCA GCAGTACGGT
GGAGTGGTAC CGGAGGTAGC CTCACGAGCG CACTTGGAAA CGATAAATGA CGCGATCGCT
CAAGCGATGG ATCAAGCTCA ACTAGGTTGG GATAAAATCG ATGGGATCGC TGCCACTTGT
GCGCCTGGAC TTGTAGGAGC GCTGTTAGTG GGGCTAACTG CTGCCAAAAC TTTAGCAATC
TTACACAATA AACCATTTTT GGGAGTTCAC CACCTTGAAG GTCACATCTA CGCGACTTAT
TTGAGTGAGC CAACTTTAGA TCCCCCTTTT CTTAGCTTAC TGGTTTCTGG GGGACATACA
AGCTTAATTT ACGTTAAGGA ATGTGGCAGG TATGAAAGTC TGGGTGAAAC TCGTGATGAT
GCTGCTGGGG AAGCTTTTGA CAAAGTAGCT AGGCTATTAA AGCTGGGTTA TCCTGGCGGC
CCAGTCATTG ATAAACTAGC GCAAACAGGT AATTCTCAAG CCTTTGCGTT GCCGGAAGGA
AAAGTGTCCT TAGCTGGTGG GGGATATCAT CCCTATGATG GCAGTTTTAG CGGCTTAAAG
ACGGCTGTAC TGCGTTTAGT GCAGCAATTA GAGAGGGATG GAGATCCATT GCCTATAGAG
GACATTTCCG CCAGCTTCCA GGCGACAGTA GCCAAGGCAT TAACCAAGAG AGCGATCGCC
TGTGCTTTAG ACTATGGTCT AGATACCATT GCTGTAGGTG GTGGGGTAGC CGCTAACAGT
GGTTTGAGAC AGCACCTACA AGCAGCAGCC ACCGCAAATA ATCTCCGCGT CCTCTTTCCC
CCCCTAAAAT TCTGTACCGA TAACGCCGCC ATGATAGCCT GCGCTGCCGC CGATCACTTA
TCACGGGGTC ATCTATCCCC CATCACCTTA GGCGTAGAGT CACGCCTCAG TCTTAGCCAA
GTGATGAAGT TATATCAGTA A
 
Protein sequence
MTTVLAIETS CDETAVAIVN NRQVCSSIIA SQIPVHQQYG GVVPEVASRA HLETINDAIA 
QAMDQAQLGW DKIDGIAATC APGLVGALLV GLTAAKTLAI LHNKPFLGVH HLEGHIYATY
LSEPTLDPPF LSLLVSGGHT SLIYVKECGR YESLGETRDD AAGEAFDKVA RLLKLGYPGG
PVIDKLAQTG NSQAFALPEG KVSLAGGGYH PYDGSFSGLK TAVLRLVQQL ERDGDPLPIE
DISASFQATV AKALTKRAIA CALDYGLDTI AVGGGVAANS GLRQHLQAAA TANNLRVLFP
PLKFCTDNAA MIACAAADHL SRGHLSPITL GVESRLSLSQ VMKLYQ