Gene Ava_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1478 
Symbol 
ID3682521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1823334 
End bp1823828 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content47% 
IMG OID637716817 
Productphotosystem I reaction center protein PsaF, subunit III 
Protein accessionYP_321996 
Protein GI75907700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.94219e-12 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAT TGTTTGCTTT GATTTTAGTG ATTTGTCTGT CATTCAGTTT CGCTCCCCCA 
GCCAAAGCCC TGGGAGCTGA TCTGACACCT TGTGCAGAAA ATCCCGCATT TCAAGCACTG
GCAAAAAATG CCCGCAATAC TACAGCAGAC CCCCAATCAG GACAAAAACG TTTTGAGCGT
TATTCTCAAG CGCTTTGTGG TCCGGAAGGC TATCCTCACC TGATTGTTGA TGGTCGTCTT
GATCGTGCTG GTGATTTTCT AATTCCCAGC ATTCTCTTCC TCTACATTGC CGGTTGGATT
GGTTGGGTAG GTCGTGCTTA CCTACAAGCA ATCAAAAAGG ACTCAGATAC TGAACAAAAA
GAGATCCAAC TCGATTTGGG TCTTGCGCTA CCCATTATCG CTACCGGCTT TGCTTGGCCA
GCAGCCGCAG TTAAAGAACT TCTTTCTGGA GAATTAACTG CTAAGGACTC TGAAATCACT
GTTTCTCCCC GCTAA
 
Protein sequence
MRRLFALILV ICLSFSFAPP AKALGADLTP CAENPAFQAL AKNARNTTAD PQSGQKRFER 
YSQALCGPEG YPHLIVDGRL DRAGDFLIPS ILFLYIAGWI GWVGRAYLQA IKKDSDTEQK
EIQLDLGLAL PIIATGFAWP AAAVKELLSG ELTAKDSEIT VSPR