Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1467 |
Symbol | |
ID | 3682510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1811212 |
End bp | 1812090 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716806 |
Product | glutamate racemase |
Protein accession | YP_321985 |
Protein GI | 75907689 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0107271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.23474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATTCAT CTTCCAGCAT TGAAGGTAAT CTTTACGGTT TCTCAGAACA AGAACCTCAA CGCGCCCCCA TCGGCGTATT TGATAGTGGT GTAGGCGGGT TAACGGTACT GCGGCAAATC TATCGCCAAC TACCCAATGA ATCGGTAATA TACTTTGGTG ACACAGCTAG ACTACCTTAC GGTATCCGCT CGCAAGCGGA GATTTTAACG TTTGTGCGCG ACATCCTTGA CTGGATGCAG CAACAACACG TCAAAATGGT AGTCATGGCT TGCAATACCA GTTCTGCCCT CGCTTTAGAT ATTGTTCGTG AGGAATATGA CTTCCCCATT CTTGGTGTCA TCCTGCCTGG GGCTAAAGCC GCAGTACAGC AAGGTAAGCG TATTGGCGTA ATTTCTACTC CAGCTACAGC CAAAAGTAAT GCCTATCGTC AAGCAATTTG GGAAATAGAC CCCAATGTCG AAGTCTGGCA AGTTGGTTGT CCGGAATTTG TTCCCCTAAT TGAACAAAAC CGTATCCAAG ACCCATACAC CACAGAAGTA GCCAGGGCTT ATTTAGAACC CCTAATTCAG CAAGATATTG ATACTTTAGT TTATGGCTGT ACCCATTATC CTTTGCTTGC GCCAGTACTG CGATCGCTTC TCCCCCCCCA AGTCAAAATC ATTGACCCTG CTGTTCACGT CGTCACAGCT TGTACCCAAG AATTAGACAT CCTTGGACTC AGCAACACTC ACCCACCATT ACCAACGCGC TTTGCCGTTA GTGGTTGTCC CCAACAGTTT TCTCAATCAG GAGTAAATTG GTTAGGTTAT ACCCCCTTAG TTGAAGCCGT CGATTTTACT GGCATACCAG TTTCCCAACT TCAACAGGAT TTGGCATAA
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Protein sequence | MYSSSSIEGN LYGFSEQEPQ RAPIGVFDSG VGGLTVLRQI YRQLPNESVI YFGDTARLPY GIRSQAEILT FVRDILDWMQ QQHVKMVVMA CNTSSALALD IVREEYDFPI LGVILPGAKA AVQQGKRIGV ISTPATAKSN AYRQAIWEID PNVEVWQVGC PEFVPLIEQN RIQDPYTTEV ARAYLEPLIQ QDIDTLVYGC THYPLLAPVL RSLLPPQVKI IDPAVHVVTA CTQELDILGL SNTHPPLPTR FAVSGCPQQF SQSGVNWLGY TPLVEAVDFT GIPVSQLQQD LA
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