Gene Ava_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1454 
Symbol 
ID3682536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1795951 
End bp1797186 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content42% 
IMG OID637716793 
Productesterase/lipase/thioesterase 
Protein accessionYP_321972 
Protein GI75907676 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0950589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0024577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAATC TGCTCCCGTC TATCAAAGAA GTCTTCTCCA TTGTGGGGAT ACTTTTGAGC 
TTTATTGGTC TTTTCTTGAG CATCTGGATT ATAATTCCAG CACCAATTTA CCTTTTACTA
CCTCTAGGGG TGGGAGCGCC AGAAGTCTGT CATTGGTCAC TATTGTTAAA TGCTACAGCT
TTTGCCCTCT TGCTTTTCAG ATTACCTGGT AACTTACTGC AATACGCTGC TTTAAGTATT
AGTATAGTTG GAATTATTCT CAGTATAACG CCACTGCTGC AAATACCAAC TACGCAACAG
CAGATGCAGT CAGCAATGGA GAAACAATTA GGTAAAGACT ACCTCAAACC AATTCTAGAA
CAAAAACATT TTGGGCGATC GCCTATGATG GGGCGTACCT TATCCCATCC TTTTAATATC
ATAGATGCGT TTAAAGGTAT TCACATAGAT GATGTACGTT ACACACCCAA CATCGAATTT
GCATCACCTG ATGGGATATC TTTGCGCCTC AACATCTACC GTCCTCAGCA AATTGGCAAA
TACCCCGGAA TCGTCGTCAT TCATGGCGGA GGTTGGCAAA GTGGAAGTCC AGAAAATAAC
GCCGATTTCA GTCGATATAT GGCCGCTAGA GGCTATACAG TCTTTGCCAT TACTTACCGC
TATGCACCCA CTTACAAATT TCCAGCCCAA CTTGATGATG TCCGCAGCGC CTTAACTTTT
ATCCAGCAAC ACGCCACCGA GTATGAAACC GATATTAACC GTATCGCCAT ACTTGGACGT
TCCGCCGGTG GACAATTAGC AATGTTAACT GCTTATCAGC AAAATGCTTT ACCCATTCGT
GCAGTCATTA GTTATTATGC TCCATCTAAC CTAGCAAAAG GTTATCGAGA ACCACCTACA
CCAGACCCCT TAAATGTAAG ATCAGTACTT GAAGCTTTTT TAGGTGGTAC ACCAGATCAA
GTCCCAGAAC AATATACTAA AGCTTCCCCA ATTAATTACG TGAATCGTCC ACTGCCACCG
ACTTTGTTAA TTCATGGTGG TCGCGACCAT ATCATCCAAA TCATTTTCCC CAGAACTTTG
TTTCAGTCTT TGCAAAATAG TGGAAATAAA GCGATTTTAT TAGAAATTCC TTGGGCTGAA
CACGCTTTTG ACTATATATT CAATGGAGCA AGTAATCAGT TAGCCCTTTA CCACACCGAG
CGTTTTTTAG CTTGGGCATT GCAAGAAAAA GTATGA
 
Protein sequence
MPNLLPSIKE VFSIVGILLS FIGLFLSIWI IIPAPIYLLL PLGVGAPEVC HWSLLLNATA 
FALLLFRLPG NLLQYAALSI SIVGIILSIT PLLQIPTTQQ QMQSAMEKQL GKDYLKPILE
QKHFGRSPMM GRTLSHPFNI IDAFKGIHID DVRYTPNIEF ASPDGISLRL NIYRPQQIGK
YPGIVVIHGG GWQSGSPENN ADFSRYMAAR GYTVFAITYR YAPTYKFPAQ LDDVRSALTF
IQQHATEYET DINRIAILGR SAGGQLAMLT AYQQNALPIR AVISYYAPSN LAKGYREPPT
PDPLNVRSVL EAFLGGTPDQ VPEQYTKASP INYVNRPLPP TLLIHGGRDH IIQIIFPRTL
FQSLQNSGNK AILLEIPWAE HAFDYIFNGA SNQLALYHTE RFLAWALQEK V