Gene Ava_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1443 
Symbol 
ID3682584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1784697 
End bp1785371 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content42% 
IMG OID637716782 
Producthypothetical protein 
Protein accessionYP_321961 
Protein GI75907665 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.309617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATT ACAATCCATT AGCTTGCTTA CCATCATCAG AGGAACTACC AGACTCGGAC 
GATACCCCCG TGGATAATGA ATTACAAGAT TTGATTCCCG GTTTACTCAA AGCCCTTTTG
GCGATGGCTT GGCCAGAACG CATGGATTGG TTTTTTGGCG TAGATATGGG TATTTATTAT
GACCCTGACT CACCAGCAAT AGTACCGGAT GGGTTTTTGA GTTTGGGTGT AGAACGATTT
TATGATGCAA ATCTTCGTCC CAGTTATGTG CTTTGGGAAG AAAAGAAACT ACCAGTATTA
GTGCTGGAGG TAGTATCCCA AACATATCGC GGTGAATACT CAACTAAGAA AGCGGAGTAT
GCAAAACTAG GGATTTTGTA TTATGTGGTT TACAATCCAT TGCGTCGCCG CAAGCCACGA
TTGGAAGTAT ACAAATTAGT TAACAATGTT TATGAGTTAT ATGATGGCAA TCCTGTGTGG
CTACCAGAAA TAGGTTTAGG AATTGGTATA GAACAGGGAA CTTATCTCGG TATTCCCCGC
GAGTGGGTGT ATTGGTATAA CCAAGAAGGG CAAAGGCTTT TAACTCCGGA AGAACAAGCA
CAGCAAGCAC AGCAACGCGC CGAATTATTA GCAGAAAGAT TGCGATCGCT TGGCGTAGAT
CCTGATTTAA TCTAA
 
Protein sequence
MLNYNPLACL PSSEELPDSD DTPVDNELQD LIPGLLKALL AMAWPERMDW FFGVDMGIYY 
DPDSPAIVPD GFLSLGVERF YDANLRPSYV LWEEKKLPVL VLEVVSQTYR GEYSTKKAEY
AKLGILYYVV YNPLRRRKPR LEVYKLVNNV YELYDGNPVW LPEIGLGIGI EQGTYLGIPR
EWVYWYNQEG QRLLTPEEQA QQAQQRAELL AERLRSLGVD PDLI