Gene Ava_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1421 
Symbol 
ID3682657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1752659 
End bp1753894 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content38% 
IMG OID637716758 
Producthypothetical protein 
Protein accessionYP_321939 
Protein GI75907643 
COG category[S] Function unknown 
COG ID[COG4399] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTGGT CACATCTTTG GCTGTATGTA TCTCCCCCAA TATTGGGTGG AATTATTGGC 
TATTTCACCA ATGATATAGC TATCAAAATG CTATTTCGTC CCTACCGAGC AATTTATATT
GGCGGACGAA GAGTGCCATT CACACCCGGA TTGATTCCTC GCAACCAGGA ACGTTTGGCA
AAGAATATTT CTGATACAAT CATGGGGTCG TTACTGACAC CCGATGAATT GCAAAAATTG
GCACGGCGTT TATTGAAAAC TGAGCGTGTA CAAGGTGCAA TTCTCTGGTT GTTGCAACTT
GCCATAGATC AAATTAAAAC CGATACAAAC AAGAAAAGCG CCAAAATTGT AGCGGGTATT
TTGCGGGATT TGATAGGGGA ATCATTGCCT CGCTTACTCA AGGTTTTGGC AAGAAGGGAA
GATTTTTTAG AAGCGCAAAT TAATCAGATT TTTGATCAGA TCCTCCTAGA ATTACAACTC
AGTGAAGAAC AAGCTAGTAG ACTAGCCGAT TGGTTCTTAG AAGTTGTTTT GCCACCAGAT
GTTATCCGGC AAGCGATTGT AGATTTCTTA ACAGATCGCA CAATTCAAAT TATTGACGAA
AGCTTTCGGG AAAAAACCAG TGGTACTTAT TGGGTAGTAG CAAATCTGTT TGGTTTACGT
AACACCCTTA CAAGGTTACG TACTTTTTGT CTAGATGAAA AAGAAGCGAC TAATAATCGT
TTAACAGAAT TAATTCAAGA TTTGCAGATG CGCGATCGCT TCAGAAAAAT TTTGCAGAAT
TTAACATTGC AAAATTTACC AATCGGCACA GTCAGACAAC TGCGAAAAAC TACACGAGAA
ACTGTTCGTC AATATATTCA AACCAGTGGT AGCGACTTAC TACAAGGATT AACAGACTCT
ATCAACTGGG AAAATATCGC CGAATTGCTG TTAAATCGTC TGAGTAATTC ACCAGTGGTT
ATGAGTTCTT TAGAAGTCGT CAGCCAAGAA TTAGCTCTAA TTTTAGAACG ATACCTAGAA
AAAGATTTAG AGGTCATTGT TGCCCAGGTA ATTCCTATTT TGTCTATAGA TCAAGTAATT
GTTGACCGTG TAAAATCAAC TTCACCTGCT GATTTAGAAG CAGCAATTGA GGGAATTGTT
AAAAATGAAT TACAGGCAAT TGTCAGTCTA GGTGGAATAT TAGGCTTAAT AGTCGGACTA
TTTCAAACAG CATTTTTCAT TTTTAGCCAA CAGTAA
 
Protein sequence
MDWSHLWLYV SPPILGGIIG YFTNDIAIKM LFRPYRAIYI GGRRVPFTPG LIPRNQERLA 
KNISDTIMGS LLTPDELQKL ARRLLKTERV QGAILWLLQL AIDQIKTDTN KKSAKIVAGI
LRDLIGESLP RLLKVLARRE DFLEAQINQI FDQILLELQL SEEQASRLAD WFLEVVLPPD
VIRQAIVDFL TDRTIQIIDE SFREKTSGTY WVVANLFGLR NTLTRLRTFC LDEKEATNNR
LTELIQDLQM RDRFRKILQN LTLQNLPIGT VRQLRKTTRE TVRQYIQTSG SDLLQGLTDS
INWENIAELL LNRLSNSPVV MSSLEVVSQE LALILERYLE KDLEVIVAQV IPILSIDQVI
VDRVKSTSPA DLEAAIEGIV KNELQAIVSL GGILGLIVGL FQTAFFIFSQ Q