| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1386 |
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| Symbol | |
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| ID | 3682817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1707979 |
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| End bp | 1710183 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716724 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_321905 |
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| Protein GI | 75907609 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.216053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGG ACTCTTTACA AGGTTTTGAA GAAGTAGATA TTCACAAATA CGTAGAAGTT
CTTCAACGAC GTTGGTTAGC TGTAGTAGGA ATTTTTGGAC TATCGCTAAC CCTTGGGTGT
GTGTATGCCT TTTCACAAAA GCCTTCATAC AAAGCAGAAG GAAGTGTGAT GATTAAAACT
AATCGCACTT CCTCACTCAC TGGTTTACCA CAGGACATTG GTCGCTTAGA ACCATTGAAT
GTGAATGACA ACCCCTTGGA AACTCAAGTG AGAATTATTG GCTCAAATCC AGTACTTGAG
CAAACGATTA AAGCACTTAA CCTTAAAGAT AAAAATGGCA AACCGCTATC AATTAGAATT
TTTGCCAAAC AACTAAAGAT AGAAGGCATC AAAGGCACAG ATGTTGTGCA GCTTTCTTAT
AAGAGTAATG ATCCTGCACT AGCTGCCAAA GTTGTCAATA AAGTTATTGA CAATTATATA
GCCTTAAATA TTAAAGCCAA TCAAGACGAA GCACTCACAG CTAAACAAGT CCTGATTGCG
GAAATACCCA AAGCTGAGAC AAGCGTCAAA AAAGCTGAGT CAGAACTGCG GATATTTAAA
GAAATCAATA AAATTATTGC TCTAGAACAG GAAGCAACCG TAGCGGTTGA TACCGTTTCC
AAACTTAGCA ACCGCATCTC TGAAGCACAA GCACAACTAA ACGACGTTAC GGGTCGTTTA
GAACAGTTAC GCGCTCAAGC TCAGGTTGAT TCACAACAAG GTGTCATCGC ATCCGAATTG
AGCCAAGCGC CGGGAGTGCA GAAAGTACTA GCGGAACTCC AAGAAACAGA AAGTAAATTA
GCGGTTGAAC GTACTCGCTT TGAATCTGAA CACCCCGCAA TTACTAGCTT AGAAGAAAAG
ATTGTAGTTC TGAAAAACTT GCTCAAAGAT CGCACAGGAC AAGTAGCAGG TACAGCGCAG
GTTACCCAGG GAAGCTTACA GGTCGGGCAA CTGAAGCAAA GCATCATAGC AGATATTACT
CGTGCAGAGT CACAACGTGT TGGTTTAGAA AGACAAATCA GTACACTCTT GCAACAACGA
GAGGCATACA TTAAACGAGC CAACTATTTA CCAAAACTCG AACAAAATCA AAGAGAGTTA
GAACGGAGGC TACAAGCAGC ACAAGGAACC TACGAAACCC TCCTGAAAAA ACGCCAAGAA
ATTGACATTG CTCAAAACCA AAAGATTCCT AATGCGCGGG TCATTTCCTA TGCCTTAATT
CCCGATTTCC CAGAGGGGCC CCGCAAAATT CTATTTATTA TTGGCGGTGG AGTAGCTGGT
ATTTTCTTAG GTATCATTGC CGCCTTTAGT ATAGACTTGA TCGATCGCTC AGTGAAGACT
GTTAAGGAAG CTAAAGAAGT CCTGAGATAC ACCGTTTTAG GAGTTATTCC TACATTAGGT
AGAAACACTA AAGATGATAT ACCCATACCA GGACTTGATA GAGCTGTTCC CAAAATCATT
GGTAGAGATA TCCCCTACTT TCCCTTAGGT GACGCATATC AGATACTGCA AGTTAATTTA
AAGTTCCTCT GTTCTGATAA ACCACTCAAA AGTATTGTAG TCACCAGTTC CGTCCCTAAA
GAAGGCAAGT CAGAAGTATC GGCAAATTTA GCTGTAACTA TGGCTCAGGC TGGTCGTCGG
GTGTTGTTGG TAGATGCAGA TATGCGTCAC CCCATACAAC ATCATATTTG GGATCTATCT
AATGCGATCG GGCTAACCAA CGTCCTCATT GGTCAAGTAA CTTTAGATGA AGCAGTACAA
GAAGTAATGC CCAATTTAGA GGTACTTCCG TGCGGAATTT TACCACCTAA TCCTGTAGCC
ATGTTAGATT CTCAACGCAT GGCCACATTG ATGAGTAACT TTGCTAGGGA TTACGACTTT
ATTATCTTTG ATACACCACC CCTAACAGGC ATAGCGGATG CGGCTGTATT AAGTACCCTG
ACTGACGGAA TTTTATTAGT TGTTCGTCCG GGGGTAGTTG ATTTTAATAG TGCTAATGCA
GCTAAAGAGT TTTTAACTCA GTCAGGTCAA AAGGTTTTAG GAATAGTCAT CAATGGAGTG
AATATTAAAA ACGAACCGAA CGGTTACATT TATTCCTCAA AATACAGACA ACTTGAACCA
AATTCCATAT CTAGTAGCTT AAGCAAGTTG TCTAGAAAAA GTTGA
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| Protein sequence | MTMDSLQGFE EVDIHKYVEV LQRRWLAVVG IFGLSLTLGC VYAFSQKPSY KAEGSVMIKT
NRTSSLTGLP QDIGRLEPLN VNDNPLETQV RIIGSNPVLE QTIKALNLKD KNGKPLSIRI
FAKQLKIEGI KGTDVVQLSY KSNDPALAAK VVNKVIDNYI ALNIKANQDE ALTAKQVLIA
EIPKAETSVK KAESELRIFK EINKIIALEQ EATVAVDTVS KLSNRISEAQ AQLNDVTGRL
EQLRAQAQVD SQQGVIASEL SQAPGVQKVL AELQETESKL AVERTRFESE HPAITSLEEK
IVVLKNLLKD RTGQVAGTAQ VTQGSLQVGQ LKQSIIADIT RAESQRVGLE RQISTLLQQR
EAYIKRANYL PKLEQNQREL ERRLQAAQGT YETLLKKRQE IDIAQNQKIP NARVISYALI
PDFPEGPRKI LFIIGGGVAG IFLGIIAAFS IDLIDRSVKT VKEAKEVLRY TVLGVIPTLG
RNTKDDIPIP GLDRAVPKII GRDIPYFPLG DAYQILQVNL KFLCSDKPLK SIVVTSSVPK
EGKSEVSANL AVTMAQAGRR VLLVDADMRH PIQHHIWDLS NAIGLTNVLI GQVTLDEAVQ
EVMPNLEVLP CGILPPNPVA MLDSQRMATL MSNFARDYDF IIFDTPPLTG IADAAVLSTL
TDGILLVVRP GVVDFNSANA AKEFLTQSGQ KVLGIVINGV NIKNEPNGYI YSSKYRQLEP
NSISSSLSKL SRKS
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