Gene Ava_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1385 
Symbol 
ID3682816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1706818 
End bp1707771 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content31% 
IMG OID637716723 
Productglycosyl transferase family protein 
Protein accessionYP_321904 
Protein GI75907608 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.593757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.173053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAA AAAAAATCAA AACGTCTTGC TTAATTAATA ATTATAATTA CGCAGCCTTT 
CTGTCAGAAG CAGTTGCTAG TGCTTTACAA CAAACAGTTA AATTTGATGA AATTATTATT
GTTGATGACG CATCTACAGA TAACTCTGCC GAGGTGATAG CTAAGTTTGC TCAACAGGCA
GATATTAAAT ATATATTAAA AGACAAAAAT CAAGGTCAGC TATCTTCATT CAACGAAGCT
TTTTTAAATG CCTCTGGAGA CATCATCTTT TTTTTAGATG CTGATGATGC TTATGAACCT
GAATATTTAG AAACTGCCCT GAATTTTTAT GATAGACGTA GCGAATGTGA TTTTGTATTT
TGTGCCTATA AAAAATTTGG AGCAGTAGAA GGCATATTTC AAGATTATCA AATAGATGTA
GATTTGGGTT ATTCAGTCAT TAGAACCTTA TGTAATGGTG AATGGATTGG CTCGATAACT
TCAACATTGT CCATGCGTAG AAACATACTG AGGAAAGTTT TACCTATTCC TAATACAGAA
GATTGGCGAG TTAGGGCTGA TGATTGTTTG GTTTGGGGGG CTTCTTTAGT AGGAGCAAAG
AAATTTTATT TGTCTCAACC TTTAGTAAGG TATAGGATAC ACCAAAATAA CCAATTTCAT
AATAGTAAAT TTGTAAATAC AGATAAAGAT TATGAATATA AGAGATTTTG GAAGCGCAAT
TCATTATTTA ATTACATTCT GCAAAAAAAT AATTTAGAGT TGCCTTTGTT ATTAGCTTTT
ACATCACTGA ATGAGCTAAA AACAATACCA TGTCCTAATA CTCAAGATTT CATATCGTAT
TTAAAAATCA TATTTCTATT TGAGAAGAAT TTATATTGGA AAATTAAGGG CATACTTTTA
TTATTTAATT ATCTTGTCAA AGTTTTGCTG AGTGGGAAAT TACAACTAAG GTAA
 
Protein sequence
MDTKKIKTSC LINNYNYAAF LSEAVASALQ QTVKFDEIII VDDASTDNSA EVIAKFAQQA 
DIKYILKDKN QGQLSSFNEA FLNASGDIIF FLDADDAYEP EYLETALNFY DRRSECDFVF
CAYKKFGAVE GIFQDYQIDV DLGYSVIRTL CNGEWIGSIT STLSMRRNIL RKVLPIPNTE
DWRVRADDCL VWGASLVGAK KFYLSQPLVR YRIHQNNQFH NSKFVNTDKD YEYKRFWKRN
SLFNYILQKN NLELPLLLAF TSLNELKTIP CPNTQDFISY LKIIFLFEKN LYWKIKGILL
LFNYLVKVLL SGKLQLR