Gene Ava_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1377 
Symbol 
ID3682808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1698307 
End bp1699200 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content40% 
IMG OID637716715 
Productglycosyl transferase family protein 
Protein accessionYP_321896 
Protein GI75907600 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0605163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGC CAACCCTAGC GGTAATCATG ACTTGCCACA ACAGACGTAA TACCACTCTT 
GCTTGTTTGC AAGCTCTATA TCAACAAACA AATCATTTTG ATGTTTATTT AACTGATGAT
GGTAGCACTG ATGGTACAGC AGAGTTAATT AAAGCAGAAT ATCCAAATGT CAAAATCCTT
CAGGGGGATG GTAATTTATT CTGGGTTGGG GGAATGCACC TGGCCTTTGG TGAAGCGATA
AAAAATCAGT ATGATTACTA CCTGTGGTTG AATGACGACA CATTTCTCGA AGCTGATGCT
TTAGAGAAGT TATTGCAGGT TCATCAAAAT TTGGCAGCAC AAGGTTACGA GCAATCAATT
GTAGTCGGTT CTACTCAAGA CCCGATTACG AAGCAAGCCA CTTATGGCGG AGCTGTGAAA
TCGAAAAAGT GGTATTCTAA CAAATTTGAA TTTTTAGAAC CAACTTTAGA TGTACAAAAA
TGTGATGCTA TGTACGGCAA CTGCGTTCTC ATTCCTCACA GTGTCACCCT GAAAGTTGGT
AATATTGATA CTGCTTTTAT TCACAGTTTG GGAGATTTGG ATTACGCTCT CAGAGCGCGT
AAATTAGGTT GTCACGTATG GGCAGCACCC GGTTATATAG GTACTTGTAA TAAAAATTCC
TTCCGGAATA GCTGGGTAGA TACAAATCTT ACTGTATTAG AACGCTTGCG AAAAATTCTA
CAAATTAAAG GATTTCCGTT GCAACCCTGG ACTACATTTT GTAGCAGACA CTCTGGGCCA
TTCTGGGTAT TTTATTGGTT TTTGCCTTAT ATCAGAGCAA TCATTGGTTA CAAGAATTTG
GCAACTTCTC CTACCTTCTC TGAAGACCCA AAAGAACCTA AGCCAGAAGT TTAA
 
Protein sequence
MEQPTLAVIM TCHNRRNTTL ACLQALYQQT NHFDVYLTDD GSTDGTAELI KAEYPNVKIL 
QGDGNLFWVG GMHLAFGEAI KNQYDYYLWL NDDTFLEADA LEKLLQVHQN LAAQGYEQSI
VVGSTQDPIT KQATYGGAVK SKKWYSNKFE FLEPTLDVQK CDAMYGNCVL IPHSVTLKVG
NIDTAFIHSL GDLDYALRAR KLGCHVWAAP GYIGTCNKNS FRNSWVDTNL TVLERLRKIL
QIKGFPLQPW TTFCSRHSGP FWVFYWFLPY IRAIIGYKNL ATSPTFSEDP KEPKPEV