| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1343 |
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| Symbol | |
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| ID | 3682930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1655324 |
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| End bp | 1657054 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637716681 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_321862 |
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| Protein GI | 75907566 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.413012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0352192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAAA AATTTTCGGT AATTCACAAG CTGAAAGTAT TGTTTGTCCT AGCATTGGTA
GTTTTATTGA CAAACACTGT AATTACTTAC AGTCATACTA CAAGATTGAT GGAAAATCAG
CCATATCTCT ACATTTTAGA ACACAAAACT CTAGTAGCAT TTTGTTTAGT AATTTTTGTC
AATATTTTAT TACTAACCTA TTTATATAAA TTACTGTGCC TCTATATTAC CAAAAGTCAA
CAGGCAGAGC AGAAGATCCG TGAACAAACT GCCATTTTAA ATATAGTTAA TGACGCTGTT
TTAGTGGGTA GTATCGACCA TCAAATTATT TTTTGGAATA AAGGTGCTGA ACGTTTGTAC
GGTTGGAAAG CTGAGGAGAC ACTTGGAAAA AATATTACAG AAATTTTGTA CCAACCAAGC
TCAACTAAAT TAAAGTCAGC GCTGTCCACC GTAATGAGTG AAGGTGAGTG GCGAGGAGAG
TTACATCAAC TCAGCAAAGA TGGTGAGGAA ATTATTGTTG AAAGTCGTTG GGTTTTGGTT
AGGGATGAGG AAGGACAACC AAAATCTATT TTAAGTGTAA ATACGGAAAT TACACCCAAA
AAACAACTAG AAGCGCAACT ATTGCGATCG CAACGTCTGG AAAGTATTGG TACACTAGCA
AGTGGCATTG CTCACGACCT CAACAATATC TTAACTCCTA TTTTAATGGC GGTTCAGCTC
TTACAAATGA AACTGCATGA ACCGCAGGTA CAAAAGGTGC TGAATACTTT AGAGAGTAAT
GTCAAACGGG GCGCAAATTT ACTTAGGCAA GTGTTATCTT TTGCACGAGG TATCGAAGGG
AAAAAGACAA TTGTGCCAGT CAGGAAGCTG ATATTAGAAA TAGAGCAAAT TGTCCAGCAA
ACATTCTCTA AATCAATTAT CTGCCAAACA TACATTCCCG AAAATCTTTG GTATGTATCA
GGAGATACAA CCCAACTACA TCAAGTGTTG ATGAATTTGG TGTTGAATGC GCGTGATGCC
ATGCCTAATG GCGGGATATT GAAAATAACG GCTGATAATG TGGTGCTTTC TCCCCAGGGT
AAGCACTATA TTAAGTTATC TATAGAAGAT ACGGGTTTAG GTATACCCGC TAAAATTCAA
AAGCAAATTT TTGAACCATT CTTTTCTACA AAAGAGGTAG GCAAAGGCAC AGGTTTAGGA
CTGTCTACAG TGCTGAATAT TATTGATAAT CATGGTGGTT CTATCAATGT GCAGAGTACG
GAAGGTAAAG GTACACGATT TCAGGTGTAT TTGCCGGCTT TAGTTTCTAA TATGGAAATT
CCATTAGCTG ATTCTGTAGA GATGGAATCG CCTACTGGTA ATAGAGAATT AATTTTAGTA
GTAGATGATG AAGCCATTAT TCGTGAAATT ACTAAATCAT CTCTAGAAGC ATATAATTAT
CGAGTATTGA CTGCTAGTGA TGGTGAGGAA GCCATATCAA TCTATACAGG ATACCAAGAA
CAAATTAGTG TGGTGTTGTT AGATATGATG ATGCCATCAA TGGATGGGGC GATCGCTATC
CGCAAATTAC AAAAGATTAA TCCCCAGATC AAAATTATCG CTATTAGTGG GCTGCTATCG
GAACCCCATG AGAGTGCAAT TGCTAACATG GGAGTAAAGG CATTTTTATC TAAACCCTGC
ACAGCTAAAG AGTTAGTACA GACAATTCAT ACTGTCCACA CTGAGAATTA A
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| Protein sequence | MGKKFSVIHK LKVLFVLALV VLLTNTVITY SHTTRLMENQ PYLYILEHKT LVAFCLVIFV
NILLLTYLYK LLCLYITKSQ QAEQKIREQT AILNIVNDAV LVGSIDHQII FWNKGAERLY
GWKAEETLGK NITEILYQPS STKLKSALST VMSEGEWRGE LHQLSKDGEE IIVESRWVLV
RDEEGQPKSI LSVNTEITPK KQLEAQLLRS QRLESIGTLA SGIAHDLNNI LTPILMAVQL
LQMKLHEPQV QKVLNTLESN VKRGANLLRQ VLSFARGIEG KKTIVPVRKL ILEIEQIVQQ
TFSKSIICQT YIPENLWYVS GDTTQLHQVL MNLVLNARDA MPNGGILKIT ADNVVLSPQG
KHYIKLSIED TGLGIPAKIQ KQIFEPFFST KEVGKGTGLG LSTVLNIIDN HGGSINVQST
EGKGTRFQVY LPALVSNMEI PLADSVEMES PTGNRELILV VDDEAIIREI TKSSLEAYNY
RVLTASDGEE AISIYTGYQE QISVVLLDMM MPSMDGAIAI RKLQKINPQI KIIAISGLLS
EPHESAIANM GVKAFLSKPC TAKELVQTIH TVHTEN
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