| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1342 |
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| Symbol | |
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| ID | 3682929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1652557 |
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| End bp | 1654548 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637716680 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_321861 |
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| Protein GI | 75907565 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.139428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATT TAGATGTAGA TAACCAGTTT GAACTGGAAG ATGAAGATGA CTTTCTTTTG
GATGATGAGG ATGCAGACAT ACTCGATTTT TCAATTGAAG TTGAGTCATT GAGTAATGAT
GGAAACTCTG TAGCAGAAGA CAAATTAGTA GAGTTTTTGG ATCAGAGATA CTTAGAGGAC
TCAGAACTCA GACTGTCAGG AGAACAAAGA CTCAAACTGG AAATAATCCG TAATTTACGT
GAACCTTGCG ATCGCCTGAC TTACGGCAAA AGGTTGGAAG AAGCAGCCAA AAAGCTTGGT
AAATCAGAAC GAACGGTTAG ACGTTTAATT AAGTCTTGGG AAGAAAAAGG TATAGCTGCT
TTAGCGGAAG TTCCTAGAGC AGACAAAGGA CAGGTACGAA AAAGTGAATA CTGGTATAAC
TTGAGTCTCA AGATTTATAA ACAAGGTAAT AAAGGTGATA AAGGTGATAA AGGTGATAAA
GGAAGCGATC GCATGACTCG CACTCAAGTT GCAGAAAAAG TTGAGACTAA AGCTTATGAA
TTCGCCAAAA AAGAATTAGA AGCTGAAATA TCAAAGTTAG AAAGTCAGGG ATTTCGGGGA
CAAGACTTAG ATTGGGAGTT AAAGAAGCTA ATAAAAATCA AGGAAAAGGC CGAGGGCTTT
AAGTATTGGT CAAAGTATGG CAAACCTCCC AGCACTAGAA CAGTAGAAAG ATGGCTCAAA
CCAGTGGAGG AGAAAAGGCA TAAGTCGCGC ACTAGCCGCA GTCCAGGATG GCACGGTTCT
GAACACACAA TCAAAACCCG TGATGGTCAA GAAATATCTA TTAAGTACAC CAATCAGGTT
TGGCAAATTG ACCATACTAA GGCTGACATT TTATTAGTCG ATGAGGATGG TGAGGAGATA
GGCCGTCCTC AATTAACGAC GGTAATAGAT TGTTACTCTC GCTGCATTGT TGGATTCCGT
CTAGGTTTTG CTGCACCCAG TTCTCAAGTT GTCGCTTTGG CACTGCGTCA TGCAATTATG
CCAAAGCGTT ACAGTTCGGA GTATGAACTC AGATGTAAGT GGAGTGCTTA CGGTGTACCT
AAATATGTTT ATACGGACGG TGGTAAAGAT TTTCGCTCAA AACATTTAGT GGAATGGATT
GCTAACGAAT TAGATTTTGA ACCAATCCTA AGAAGTAAAC CTTCAGATGG TGGCATTGTA
GAACGACCAT TTAGAACTAT AAGTGGTCTA CTTTCTGAAA TGCCGGGTTA CACGGGGTCA
AGTGTCAAAG ACCGTCCAGA GGGAGCTGAA AAGAAAGCTT GTATAAGTCT TCCTGAACTG
GAAAAACTAA TTGTTGGTTA CATTGTTGAT AGCTATAACC AAAAACCTGA TGCCCGAAGT
CAAGCCAACC CTCTAACTCC CAAACAAAGT CGGATTGAGC GTTGGGAAAA AGGACTGCAA
ATGCCTCCTA CTTTGCTGAA CGATAGAGAA CTTGATATTT GTTTAATGAA GGCAGCAGAG
CGGGTTGTAT ATGACAATGG TTATCTTAAT TTTTCTGGTC TTCGTTACAG GGGAGAAAAT
TTAGGAGCTT ACGCAGGCGA CAAAGTGATC TTAAGGTTCG ACCCCAGAGA TATCACTATG
GTTTTAGTAT ATGGTCGAAA AAATAATAAA GAAATATTTT TAGCGCGTGC TTACGCTATT
GGTTTAGAAG CAGCAAGCCT ATCAGTTGAA GAAGTTAAAT ACGCACGTAA AAAAGCAGAA
AATAGTGGTA AAGGTATAAA TAATATTTCA ATTTTAGAAG AGGCTCTCAG ACGCAGAAAC
TTTTTGCAAC AGAAGAAAAA TAAAACTAAA GCTGAACGTC GCCGTTCTGA AGAGAAACGT
ATAGAGAAAA TACCACAAGT CTTGACAGAA AAGAAAAATG AACAGGTTGC GGTATTAATA
TCTCAACCCG AAGACGATGA GCCAATAGAA AAATTGGATT TGAAATTATT GCGTGAAGAG
CTGGGTTTGT AA
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| Protein sequence | MNYLDVDNQF ELEDEDDFLL DDEDADILDF SIEVESLSND GNSVAEDKLV EFLDQRYLED
SELRLSGEQR LKLEIIRNLR EPCDRLTYGK RLEEAAKKLG KSERTVRRLI KSWEEKGIAA
LAEVPRADKG QVRKSEYWYN LSLKIYKQGN KGDKGDKGDK GSDRMTRTQV AEKVETKAYE
FAKKELEAEI SKLESQGFRG QDLDWELKKL IKIKEKAEGF KYWSKYGKPP STRTVERWLK
PVEEKRHKSR TSRSPGWHGS EHTIKTRDGQ EISIKYTNQV WQIDHTKADI LLVDEDGEEI
GRPQLTTVID CYSRCIVGFR LGFAAPSSQV VALALRHAIM PKRYSSEYEL RCKWSAYGVP
KYVYTDGGKD FRSKHLVEWI ANELDFEPIL RSKPSDGGIV ERPFRTISGL LSEMPGYTGS
SVKDRPEGAE KKACISLPEL EKLIVGYIVD SYNQKPDARS QANPLTPKQS RIERWEKGLQ
MPPTLLNDRE LDICLMKAAE RVVYDNGYLN FSGLRYRGEN LGAYAGDKVI LRFDPRDITM
VLVYGRKNNK EIFLARAYAI GLEAASLSVE EVKYARKKAE NSGKGINNIS ILEEALRRRN
FLQQKKNKTK AERRRSEEKR IEKIPQVLTE KKNEQVAVLI SQPEDDEPIE KLDLKLLREE
LGL
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