Gene Ava_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1336 
Symbol 
ID3682923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1647034 
End bp1647294 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content39% 
IMG OID637716674 
Producthypothetical protein 
Protein accessionYP_321855 
Protein GI75907559 
COG category[K] Transcription 
COG ID[COG3655] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.94784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.842689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA ATCAAGTGAT TCGCTGGAAA TTAAATGAAG TGATGGCGCG AAAGCGGGTT 
AAAAATAAGG ATTTAGCTAT GATACTTGGT ATAACTGAAA ACTCAATTTA TAGATTGCGT
AAGGTTGATG AGATGCCAAG ATTAGCCCCA GAACGATTGA ATGGCATTTG CAAAGCGTTG
AATTGTCAAC CTGGGGAACT ATTGGAATAT CTGCCAGATG AAGGGGAAGG GAATGTTGTT
TCTCAGGCTG ATATAGTTTA A
 
Protein sequence
MSENQVIRWK LNEVMARKRV KNKDLAMILG ITENSIYRLR KVDEMPRLAP ERLNGICKAL 
NCQPGELLEY LPDEGEGNVV SQADIV