| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1326 |
|---|
| Symbol | |
|---|
| ID | 3682972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1629466 |
|---|
| End bp | 1633431 |
|---|
| Gene Length | 3966 bp |
|---|
| Protein Length | 1321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637716664 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_321845 |
|---|
| Protein GI | 75907549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGG ATAGAGAAAT TCAAGCGCAT AAGGAATGGT TGGGCTTCCT TCAGCCAGTG
GGGTTGGTAG TGTCGCCAAC GGCGTTAAAT AATGCCCAAA TGTCGGTAAA TCGCAACGTT
GTTGAGTTAC AGCAACGGTT AAGCGAAATA GTAAGCCGAA ATTCCTTTGA TGACAGCAGC
AACTACACCT GCGTAATTTC TGACTTTCCC ACCTTCACAG TTGAAATTCT CGGTTGGCAA
CCGACAGATT TAGTCGAGAG TCCAGAGGAT TTAACGGTAT CGCTACCAGA ATACGGTGAA
ATTTTACAAC CAACATATAC CGTACCTGAC CCAGATAAAG GTGGCTGGTT GATGCTGGTA
CAGGTCATTT CCACTGGTAC TGACTTTGAT AGAGTCAGCG AGAATATCAA ATCTACAGGA
TGGCACGCCA ACCCTCAAGG GAAATTTGAG CGACTGTTGC GGGAGAAGGA AATTCCTGTA
GGTATTTTGT GTAATGGTAC AGAATTACGT TTGGTATATG CCCCACGCGG CGAATCTTCT
GGACACCTAA CCTTTCCAGT ACAGGCGATG TGCGAAGTAT CGGGACGGTT AATTTTGGGT
GCAATGCAGA TGTTGTTGGA AGAACAGCGA GTGTTCAATG CACCAACTGA CCGCCGTTTA
GTAGCATTAC TGCAAAATAG CCGCAAGTAC CAAAACGAAG TTTCTACCAA GTTATCAGAA
CAGGTACTTG ATGCACTGTG GGAATTACTG CGTGGTTTTC AAGCTGCGAA TGACCATGCT
AAAGGACTCT TGCTTGATGA CATTGCCCAA AACGACCCCC AACATATCTA CGGTGGATTA
ATTACAGTTT TGCTGCGGTT GGTGTTTCTG CTGTATGCGG AAGATGAGGG ATTGATGCCG
CAGGGTTCGA TTTACACGCG CAACTATTCT GTAACTGGAC TTTATGAGAG ATTGCGCGAG
GATGCGGGTA ACTATCCTGA CACAATGGAA CAGCGTTATG GTGCTTGGGC TTGGTTACTC
AGTCTTTTTC GCTTAGTTTA CGATGGTGGC TGTCATGCTG ACTTATATTT GCCAGCACGT
CACGGACAGC TTTTTGACCC AGATGAGTAC GCATTTTTAG AAGGTCGTTC TCGTCATACT
ACTTATAAAG AATGGGATTT AATTGAACCG CCACGTGTTT CTGATAGCGT AGTTCATGAG
GTATTGCGAG CATTACTCGT TCTTGATGGT GAGCGTTTGT CATACCGTTC TCTAGATGTG
GAACAAATTG GTTCCGTATA CGAAGCGGCA ACCGGATACG AGGTTAAAAA AGCTACTTCT
CAATCTATTG GCTTATGGAG TAAACCAAAA AGTGCTAAAG CCTCCATTAC TGTAGTCGTT
AGCGTTGATG AGGTTTTAAA AACCAAAGCC AATGACAGGG CGAAGTATTT AAAAGAAGTG
GCAGGTTGTG AAATTTCTGG AAAATCACTG ACAGATTTAA AGCAAGCAAC AACCGCCGAG
GATTTAATTG CAGCTTTAGG ACGGAAAATA TCTCCACAAA CCCCAACTTT ATTACCTGTG
GGTTCGCTTT ATTTGCAACC AGGGGAAGAA CGGCGGCGCA GTGGAACTCA TTATACGCCC
CGTGCGTTGA CAGAACCGAT AGTTAAAGAA ACTCTCAGAC CTGTTCTGGA AGCCTTGGGT
GAACGTCCCA CACCAGAGCA AATTTTGGCT TTGAAGGTAT GCGATTTAGC TGTTGGTTCG
GGCGCGTTCT TGGTAGAAGC TTGTCGTCAG TTAGCGGAAA AATTGGTGGA AGCTTGGAAT
CAACATGGCA TGATTTCAGA AGTTCCATCA GATGAAGAAC CCTTACTGTA TGGGCGGCGT
TTGGTGGCGC AGCGCTGTTT GTATGGGGTG GATAAAAACC CGTTTGCGGT GAATTTAGCA
AAGTTATCTT TGTGGTTGGT AACTTTAGCG AAAAAGCATC CTTTTACATT TTTAGACCAT
GCGTTGAAAT GTGGTGATTC ATTGGTAGGT TTAACCCGCG ACCAACTTGT TAAATTTAAC
TGGGAAAAAG ATACTACTTA TGATGATAAA GAATTGCTTT TATTTAATGA GCAACTAAAT
AAGGTTAAGT TTAACCGTGA TGAAATTCAA AGTTTAGACG ATGAGAATTA CGATGCGAAG
CGTGATTTTT ATGAAGCAAC AGAGGAATTA TTACATGATG CTCGTCTCAA AGGTGATTTA
GTGATTGCTT CTTTCTTTGC GGCGGAGAAA GATAAAGCAA GGAAAGAGGA GAGAGACGGA
TTATTTCAGA AGTATTTTAA ATGGCGGCGA AATCCAGATG AGAGTGCAGA GGTTTTAAGT
ATTAGTAAAA AACTGCGGCA AGCAGATAAA CCTGTGAAAC CGTTTAATTG GGAAACTGAA
TTTCCAGAGG TATTTGATAG AGAAAATCCG GGGTTCGATG CAATTGTTGG AAATCCACCA
TTTTTAGGTG GGAAACGGAT TAGCACAGTA TTAGGAGATG GTTATAGAGA TTGGTTGCCT
ATAGTAAATC CAGAAGCAAA TAGTAATAGT GATTTAGTTG CTCACTTTTT TAGAAGAGCG
TTTACTCTCT TGAGAAATAA TGGATGTTTT GGTCTTATCG CAACAAATAC CATTGCTCAA
GGAGACACCC GCGATACAGG TCTGAAATAC ATATGTAATC ATGACGGTAC GATATACAAC
GCTCAAAAGC GGCTAAAGTG GGCAGGGGAT GCAGCAGTGG TAGTAAGTGT GGTAAATATC
CAAAAGGGAA TTTACGTGGG AAAAAAGATT TTAAACGGCA TAGAAGTCCC TCTTATCTCA
GCATTTCTGT TTCATACAGG CGGAAACGAA GCACCCCAAA CCTTGATTGC CAATGCAAAT
AAGAGTTTTA TTGGTTCCGA CCTACAAGGT ATGGGATTTA CATTTGATGA TACAAAAAGT
GATACTACAT CCATTGCTGA AATGCACCGC TTAACTACAA AAAATCCTAA AAATGCAGAA
GTAATTTTTC CTTATATTGG AGGTTCTGAG ATAAATACTA GACCTACTCA TGACTATCAT
CGCTATGTCA TCAACTTCGG TGATATGGAT GAAGAAAAAG CATGGGAATG GGAAGAGTTA
ATGAAAATAT TAGAAGAAAA AGTTAGACCA GAGCGTTTAA GAAAAGCAAA AGAATTAGCA
CAGTATCCTT GGTGGAGGTT TTGGAGAACT CGGCAAAAAC TGTATGATGC AATCACATCT
CTCGAACGTG TATTAGTTTG CTCTAGAGTT AACCCTAACT GCTCTTTTAC ATTTTTACCT
CCAAATTTAG TTTATGCAGA GTCACTGGTA ATTTTTGCCT TATCTAAATA TTCTGCTTTT
GGGATATTAC AAAGTTCTAC TCATGAATTA TGGGCTAGAT TTTTTAGCAG TACAGCAATG
GATTTGTTGC GTTATTCTTG TTCCGACTGT TTTGAAACCT TCCCCTTCCC CCAAAACTGG
GAAACCAACT CTACCCTAGA AACCATAGGC AAAGAATACT ACGAATACCG CGCTGCCTTA
ATGGTTCGCA ACAACCAAGG ACTCACCGAC ACCTACAACC GCTTCCACGA CCCCGACGAA
TACGACCCCG AAATCCTCAA ACTCCGCGAA CTCCACACCG CAATGGATAA AGCCGTCCTC
AACGCTTACG GCTGGTCAGA TATCCCCACC GACTGCGATT TTATCCTCGA CTACGAAGAG
GAAGAAGACA CAGAAAACAG CAGTGGACGA CAAAAGAAAA AACCCTGGCG TTATCGTTGG
CGCGAAGAAA TCCACGATGA AGTTTTAGCA CGCTTACTTG ATTTAAACCA AAAACGCGCC
GAAGCAGAAA TTTTAGGCGG TAAAGGTGCA GATAAAGGGA AGGGTAAAGG AGGGAAAAAT
AAATCTAATC AAAGAAAGTC TAAAAAGGTG ATTGAAAATG CACCAGCAAT ACCAGGAATT
ATTTGA
|
|---|
| Protein sequence | MVKDREIQAH KEWLGFLQPV GLVVSPTALN NAQMSVNRNV VELQQRLSEI VSRNSFDDSS
NYTCVISDFP TFTVEILGWQ PTDLVESPED LTVSLPEYGE ILQPTYTVPD PDKGGWLMLV
QVISTGTDFD RVSENIKSTG WHANPQGKFE RLLREKEIPV GILCNGTELR LVYAPRGESS
GHLTFPVQAM CEVSGRLILG AMQMLLEEQR VFNAPTDRRL VALLQNSRKY QNEVSTKLSE
QVLDALWELL RGFQAANDHA KGLLLDDIAQ NDPQHIYGGL ITVLLRLVFL LYAEDEGLMP
QGSIYTRNYS VTGLYERLRE DAGNYPDTME QRYGAWAWLL SLFRLVYDGG CHADLYLPAR
HGQLFDPDEY AFLEGRSRHT TYKEWDLIEP PRVSDSVVHE VLRALLVLDG ERLSYRSLDV
EQIGSVYEAA TGYEVKKATS QSIGLWSKPK SAKASITVVV SVDEVLKTKA NDRAKYLKEV
AGCEISGKSL TDLKQATTAE DLIAALGRKI SPQTPTLLPV GSLYLQPGEE RRRSGTHYTP
RALTEPIVKE TLRPVLEALG ERPTPEQILA LKVCDLAVGS GAFLVEACRQ LAEKLVEAWN
QHGMISEVPS DEEPLLYGRR LVAQRCLYGV DKNPFAVNLA KLSLWLVTLA KKHPFTFLDH
ALKCGDSLVG LTRDQLVKFN WEKDTTYDDK ELLLFNEQLN KVKFNRDEIQ SLDDENYDAK
RDFYEATEEL LHDARLKGDL VIASFFAAEK DKARKEERDG LFQKYFKWRR NPDESAEVLS
ISKKLRQADK PVKPFNWETE FPEVFDRENP GFDAIVGNPP FLGGKRISTV LGDGYRDWLP
IVNPEANSNS DLVAHFFRRA FTLLRNNGCF GLIATNTIAQ GDTRDTGLKY ICNHDGTIYN
AQKRLKWAGD AAVVVSVVNI QKGIYVGKKI LNGIEVPLIS AFLFHTGGNE APQTLIANAN
KSFIGSDLQG MGFTFDDTKS DTTSIAEMHR LTTKNPKNAE VIFPYIGGSE INTRPTHDYH
RYVINFGDMD EEKAWEWEEL MKILEEKVRP ERLRKAKELA QYPWWRFWRT RQKLYDAITS
LERVLVCSRV NPNCSFTFLP PNLVYAESLV IFALSKYSAF GILQSSTHEL WARFFSSTAM
DLLRYSCSDC FETFPFPQNW ETNSTLETIG KEYYEYRAAL MVRNNQGLTD TYNRFHDPDE
YDPEILKLRE LHTAMDKAVL NAYGWSDIPT DCDFILDYEE EEDTENSSGR QKKKPWRYRW
REEIHDEVLA RLLDLNQKRA EAEILGGKGA DKGKGKGGKN KSNQRKSKKV IENAPAIPGI
I
|
|---|
| |