Gene Ava_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1323 
Symbol 
ID3682969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1623402 
End bp1625309 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content40% 
IMG OID637716661 
Producthypothetical protein 
Protein accessionYP_321842 
Protein GI75907546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.118428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTA TTACAATTCA ATGTCGCTTG GTTGCTGAAG AAGACATCCT CCGCCAACTG 
TGGGAACTGA TGGCAGAAAA AAATACACCA CTTATAAATG AATTATTGGC ACAGGTAGGA
AAGCACCCAG AGTTTGAAAC CTGGCTAGAT AAAGGCAGAA TACCTACTGA ATTACTCAAA
ACACTTGTTA ACTCCTTCAA AACTCAAGAG CGTTTTGCTG ATCAACCTGG ACGCTTTTAC
ACCTCAGCGA TCGCTCTAGT AGATTATGTA TATAAATCCT GGTTCGCTTT GCAAAAACGA
AGAAAGCGGC AAATAGAAGG CAAAGAACGT TGGCTGACAA TACTCAAAAG TGATCTACAA
CTTGAACAAG AAAGTCAATG TAACTTAAAC GTAATTCGTA CTAAAGCCAA CGAAATTCTT
ACCCAATTTA CCCCCCAGTC CGACCAGAAT AAAAACCCTA GAAAGAGCAA AAAAGCTAAA
AAATCTGCAA AGTTACAGAA ATCTTCACTT TTTCAAATTC TTTTAAACAC TCACGAACAA
ACACAAGAGA CTCTTACTCG TTGTGCGATC GCATATCTGC TCAAAAATAA CTGTCAAATC
AGCGAACGCG ACGAAGACCC AGAAGAATTT AATAGAAATA GACGCACAAA AGAAATAGAA
ATCGAGCGAT TAAAAGACCA ACTCCAAAGT CGCATACCTA AAGGTAGGGA TTTGACAGGG
GAAGAGTGGC TAGAAACTTT AGAAATTGCT ACCGTCAATG TACCTCAAAA TGAAAAAGAG
GCAAAAGCTT GGCAAGCAGC ACTTTTAAGA AAAACTGCTG ATGTACCATT TCCTGTGGCT
TACGAATCCA ACGAAGATAT GACATGGCTG CAAAATGACA AAGATCGTCT CTTTGTTCGG
TTCAACGGCT TGGGAAAAAT GACTTTTGAA GTTTACTGTG ATAAGCGTCA TTTGCACTAC
TTTAAACGCT TCCTAGAGGA TCAAGAAATT AAACGCAATA GTAAAAACCA ATACTCAAGC
AGCTTGTTTA CTCTGCGTTC AGGAAGGCTT GCTTGGTTGC CAGGAAAACA AAAAGGTGAA
CCCTGGAAAA TAAATCAACT ACATCTTTAC TGTACTTTGG ATACTCGGAT GTGGACTGCT
GAAGGAACTC AACAGGTAGT GAATGAGAAA ATTACAAAAA TTACCGAAAC TTTAACTAAA
GCAAAACAGA AAGATGAACT CAACGATAAA CAGCAAGCTT TTATCACTCG TCAGCAATCC
ACTCTAGACC GGATTAATAA TCCTTTCCCC CGTCCCAGCC AGCCTAATTA TCAAGGGCGA
CCCTCAATCC TAGTTGGTGT TAGTTTTGGT CTAGAAAAGC CAGTAACACT AGCTGTAGTG
GATGTTGTTA AAAATGAAGT TTTAGCTTAT CGCAGCGTCA AACAACTGCT TGGCAAAAAC
TATAACCTTC TCAATCGCCA GCGACAACAA CAGCAACGCC TATCTCATGA ACGTCACAAG
GCTCAAAAAC AGAATGCGCC AAACTCCTTT GGTGAATCAG AGTTAGGACA ATATGTGGAT
AGATTATTGG CTGATGAGAT TGTGGCGATC GCTAAAACCT ATCAAGCAGG CAGTATAGTT
ATTCCAAAAC TCCGCGATAT GCGTGAGCAA ATCAGTAGTG AAATCCAATC CAGAGCAGAG
AAGAAATGCC CAGGTTACAA GGAAGTTCAA CAAAAATACG CCAAAGAATA CCGCATGAGT
GTTCATCGCT GGAGTTACGG CCGATTAATT GAGAGTATTA AATCCCAAGC TGCAAAAGCC
GGAATTTTTA CTGAAATTGG TACACAGCCA ATCAGAGGTA GTCCACAAGA AAAAGCGCGA
GATTTAGCCG TCTTCGCATA TCAAGAACGC CAAGCCGCTT TAATTTAA
 
Protein sequence
MSVITIQCRL VAEEDILRQL WELMAEKNTP LINELLAQVG KHPEFETWLD KGRIPTELLK 
TLVNSFKTQE RFADQPGRFY TSAIALVDYV YKSWFALQKR RKRQIEGKER WLTILKSDLQ
LEQESQCNLN VIRTKANEIL TQFTPQSDQN KNPRKSKKAK KSAKLQKSSL FQILLNTHEQ
TQETLTRCAI AYLLKNNCQI SERDEDPEEF NRNRRTKEIE IERLKDQLQS RIPKGRDLTG
EEWLETLEIA TVNVPQNEKE AKAWQAALLR KTADVPFPVA YESNEDMTWL QNDKDRLFVR
FNGLGKMTFE VYCDKRHLHY FKRFLEDQEI KRNSKNQYSS SLFTLRSGRL AWLPGKQKGE
PWKINQLHLY CTLDTRMWTA EGTQQVVNEK ITKITETLTK AKQKDELNDK QQAFITRQQS
TLDRINNPFP RPSQPNYQGR PSILVGVSFG LEKPVTLAVV DVVKNEVLAY RSVKQLLGKN
YNLLNRQRQQ QQRLSHERHK AQKQNAPNSF GESELGQYVD RLLADEIVAI AKTYQAGSIV
IPKLRDMREQ ISSEIQSRAE KKCPGYKEVQ QKYAKEYRMS VHRWSYGRLI ESIKSQAAKA
GIFTEIGTQP IRGSPQEKAR DLAVFAYQER QAALI