Gene Ava_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1288 
Symbol 
ID3683128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1578140 
End bp1580218 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content47% 
IMG OID637716626 
Productelongation factor G 
Protein accessionYP_321807 
Protein GI75907511 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00484] translation elongation factor EF-G
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.56702e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGTA CAAACCCGCT AGAGAAAGTA CGCAATATCG GTATTGCGGC GCATATAGAT 
GCGGGCAAAA CCACGACAAC AGAGAGAATA TTATTTTACT CTGGAATAAT TCATAAAATC
GGTGAGGTTC ACGAAGGAAC TGCTGTAACC GACTGGATGG ATCAAGAGCG GGAGCGGGGA
ATTACCATCA CTGCTGCGGC AATCAGTACC AGTTGGAAAG ATTATCAAAT TAACATTATC
GATACTCCAG GTCACGTAGA CTTCACAATT GAAGTTGAGC GCTCCATGCG GGTGTTAGAT
GGTGTGATTG CGGTATTTTG TTCCGTGGGT GGTGTACAAC CCCAATCAGA AACTGTGTGG
CGGCAAGCAG ACCGTTACAA AGTACCTCGG ATTGCCTTCA TCAACAAGAT GGATCGTACA
GGAGCGAACT TCTACAGAGT TCATGAGCAA ATGCGCGATC GCCTGCGGGC AAATGCTATT
GCCATTCAAT TACCTATCGG TAGCGAAAAC GACTTCAAGG GCATCGTAGA CTTGGTGCGG
AAGCGTGCCT ACATTTACAA CAACGACCAA GGTACAGATA TTCAGGAAAC TGATATCCCA
GCAGACTTAC AAAATCAAGT CGAAGAGTAC TACACCAAGT TGGTGGAAGC AGTCGCAGAA
ACCGATGATG CTCTGATGAC TAAGTACTTC GATGGCGAAG CACTGACAGA GGAAGAAATT
CGCTCTGCCC TGCGTCAAGG TACAATTGCA GGCACAATCG TACCCGTACT TTGTGGTTCA
GCCTTCAAAA ATAAAGGTGT ACAGTTAATG CTGGATGCAG TGGTAGATTA CCTACCCGCA
CCAACAGAAG TACCACCCAT TCAAGGCACA CTCGCTAATG GTGATACTGT TGAGCGTCGG
GCTGACGACA ACGAACCCTT AGCAGCTTTA GCCTTCAAGA TTATGGCTGA CCCATACGGT
CGCCTTACCT TTGTTCGCGT TTATTCAGGC GTTCTGAAAA AAGGTAGCTA TGTTCTAAAT
GCTACTAAGA ACAAAAAAGA ACGGATTTCC CGTTTAGTTC TCATGAAAGC AGATGACCGG
CAAGACGTAG AAGAACTACG TGCAGGTGAT TTAGGGGCTG CTCTAGGATT AAAAGACACC
TTGACTGGTG ATACTATCAC TGATGAAGGC TCACCAGTAA TTCTGGAATC CCTATTTATT
CCAGAGCCAG TGATCTCGGT AGCGGTTGAA CCCAAAACCA AGAACGACAT GGATAAGCTA
TCCAAGGCTC TGCAATCTCT CTCAGAAGAA GATCCAACTT TCCGTGTCAA CGTTGACCCA
GAAACGAACC AAACTGTAAT TGCAGGGATG GGAGAACTCC ACCTAGAAAT TCTCGTAGAC
AGGATGTTAC GTGAATTCAA AGTGGAAGCC AACGTTGGTG CGCCACAAGT AGCTTACCGC
GAAACGATTC GTAAATCAGT TACTAACGTG GAAGGTAAGT TCATCCGTCA AAGTGGTGGT
AAAGGTCAAT ATGGTCACGT TGTGATCAAT TTGGAACCTG GAGAACCAGG TACTGGCTTT
GAATTCGTCT CTAAAATTGT CGGTGGTGTA GTACCTAAAG AGTACATAGG CCCTGCCGAG
CAAGGTATGA AAGAAAGCTG TGAATCTGGT ATTTTAGCTG GATATCCACT CATTGACGTG
AAAGCAACGC TAGTTCATGG CTCCTACCAC GATGTGGACT CTTCGGAAAT GGCTTTCAAA
ATTGCTGGAT CAATGGCGCT GAAAGAAGCT GTGCTTAAAG CCTCACCAGT ACTATTAGAG
CCTATGATGA AAGTCGAAGT GGAAGTTCCT GAAGACTACA TTGGGAACGT CATTGGCGAC
CTCATCTCCC GTCGGGGGCA GATAGAAAGC CAAAGCACTG AACAGGGACT CGCTAAAGTG
GCATCAAAAG TTCCACTGGC GACTATGTTC GGCTACGCCA CTGATATCCG CTCGAAAACC
CAAGGTCGGG GTATCTTTAC GATGGAGTTC AGTCACTACG AAGAGGTGCC TCGCAGCGTA
GCTGAAACTA TCATTGCAAA AAGCAAAGGG AACGCTTAA
 
Protein sequence
MARTNPLEKV RNIGIAAHID AGKTTTTERI LFYSGIIHKI GEVHEGTAVT DWMDQERERG 
ITITAAAIST SWKDYQINII DTPGHVDFTI EVERSMRVLD GVIAVFCSVG GVQPQSETVW
RQADRYKVPR IAFINKMDRT GANFYRVHEQ MRDRLRANAI AIQLPIGSEN DFKGIVDLVR
KRAYIYNNDQ GTDIQETDIP ADLQNQVEEY YTKLVEAVAE TDDALMTKYF DGEALTEEEI
RSALRQGTIA GTIVPVLCGS AFKNKGVQLM LDAVVDYLPA PTEVPPIQGT LANGDTVERR
ADDNEPLAAL AFKIMADPYG RLTFVRVYSG VLKKGSYVLN ATKNKKERIS RLVLMKADDR
QDVEELRAGD LGAALGLKDT LTGDTITDEG SPVILESLFI PEPVISVAVE PKTKNDMDKL
SKALQSLSEE DPTFRVNVDP ETNQTVIAGM GELHLEILVD RMLREFKVEA NVGAPQVAYR
ETIRKSVTNV EGKFIRQSGG KGQYGHVVIN LEPGEPGTGF EFVSKIVGGV VPKEYIGPAE
QGMKESCESG ILAGYPLIDV KATLVHGSYH DVDSSEMAFK IAGSMALKEA VLKASPVLLE
PMMKVEVEVP EDYIGNVIGD LISRRGQIES QSTEQGLAKV ASKVPLATMF GYATDIRSKT
QGRGIFTMEF SHYEEVPRSV AETIIAKSKG NA