Gene Ava_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1240 
Symbol 
ID3683178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1527144 
End bp1527932 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content45% 
IMG OID637716578 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_321759 
Protein GI75907463 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.809669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTAA AATTTTCACA ATTCTTGGTT GCATTTTTGA TCATCGGCTC CCTGATTTTG 
GGAGGTTGTT CTGCCCAGGA GGTTAGCCTT AACTCTTCTC CAGGGTCTAC AGCAGTTGAG
ACAACCACCA CTACTGCTGA AGCAACATCT GTGTCTGAAA CAAATAGTGA GAGTAATTCG
GGAATGACAA ATTCTTTACC ACGCCTCGAA GGCAAAGCTA CTGTGGTAAT TACAGTTAAA
GGGTCGCCAA TTACTGTCGA GGTAGACGGT ACAAATGCCC CCATCACAGC TGGCAATTTC
ATTGATTTAG TTCAAAAAGG TGTTTACGAT AACACAGTTT TCCACCGAGT TGTCCGTCAG
CCTCAACCCT TTGTAGTGCA AGGCGGCGAT CCTCAAAGTA AAGACCCAAA AAGTTCTCAA
CAACTTTGGG GAACTGGTGG CTACATTGAC CCAAAAACAG GCACTGAACG CCGCATTCCT
TTGGAAATTA AACCCAAAGG GGAGGCAGAA CCACTTTATG GCAAAACTTT CGAGTCTGCT
AGAGTGATGG TAGCACCTGA GTTACAGCAT AAACAAGGGG CAGTCGCAAT GGCGCGATCG
CAACAACCAG ATTCGGCATC TTCACAGTTT TATTTTGCTC TAGCCGATTT GGGATTCCTC
GACGGTAACT ATGCTGTATT TGGTCAAGTT ACTCAAGGCT TTGACGTAGT GAACAAAATT
CAGCAAGGCG ATCGCATCGA CTCGGCTAAA GTTACTCAAG GTGCTGAGAA TCTGAAAGCA
GCACAATAG
 
Protein sequence
MRLKFSQFLV AFLIIGSLIL GGCSAQEVSL NSSPGSTAVE TTTTTAEATS VSETNSESNS 
GMTNSLPRLE GKATVVITVK GSPITVEVDG TNAPITAGNF IDLVQKGVYD NTVFHRVVRQ
PQPFVVQGGD PQSKDPKSSQ QLWGTGGYID PKTGTERRIP LEIKPKGEAE PLYGKTFESA
RVMVAPELQH KQGAVAMARS QQPDSASSQF YFALADLGFL DGNYAVFGQV TQGFDVVNKI
QQGDRIDSAK VTQGAENLKA AQ