Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1240 |
Symbol | |
ID | 3683178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1527144 |
End bp | 1527932 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716578 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_321759 |
Protein GI | 75907463 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.809669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTAA AATTTTCACA ATTCTTGGTT GCATTTTTGA TCATCGGCTC CCTGATTTTG GGAGGTTGTT CTGCCCAGGA GGTTAGCCTT AACTCTTCTC CAGGGTCTAC AGCAGTTGAG ACAACCACCA CTACTGCTGA AGCAACATCT GTGTCTGAAA CAAATAGTGA GAGTAATTCG GGAATGACAA ATTCTTTACC ACGCCTCGAA GGCAAAGCTA CTGTGGTAAT TACAGTTAAA GGGTCGCCAA TTACTGTCGA GGTAGACGGT ACAAATGCCC CCATCACAGC TGGCAATTTC ATTGATTTAG TTCAAAAAGG TGTTTACGAT AACACAGTTT TCCACCGAGT TGTCCGTCAG CCTCAACCCT TTGTAGTGCA AGGCGGCGAT CCTCAAAGTA AAGACCCAAA AAGTTCTCAA CAACTTTGGG GAACTGGTGG CTACATTGAC CCAAAAACAG GCACTGAACG CCGCATTCCT TTGGAAATTA AACCCAAAGG GGAGGCAGAA CCACTTTATG GCAAAACTTT CGAGTCTGCT AGAGTGATGG TAGCACCTGA GTTACAGCAT AAACAAGGGG CAGTCGCAAT GGCGCGATCG CAACAACCAG ATTCGGCATC TTCACAGTTT TATTTTGCTC TAGCCGATTT GGGATTCCTC GACGGTAACT ATGCTGTATT TGGTCAAGTT ACTCAAGGCT TTGACGTAGT GAACAAAATT CAGCAAGGCG ATCGCATCGA CTCGGCTAAA GTTACTCAAG GTGCTGAGAA TCTGAAAGCA GCACAATAG
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Protein sequence | MRLKFSQFLV AFLIIGSLIL GGCSAQEVSL NSSPGSTAVE TTTTTAEATS VSETNSESNS GMTNSLPRLE GKATVVITVK GSPITVEVDG TNAPITAGNF IDLVQKGVYD NTVFHRVVRQ PQPFVVQGGD PQSKDPKSSQ QLWGTGGYID PKTGTERRIP LEIKPKGEAE PLYGKTFESA RVMVAPELQH KQGAVAMARS QQPDSASSQF YFALADLGFL DGNYAVFGQV TQGFDVVNKI QQGDRIDSAK VTQGAENLKA AQ
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