| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1234 |
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| Symbol | |
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| ID | 3683172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1520450 |
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| End bp | 1521163 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716572 |
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| Product | ABC transporter-like |
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| Protein accession | YP_321753 |
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| Protein GI | 75907457 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02982] ABC exporter ATP-binding subunit, DevA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0135817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAGCA TTAATACTTC CGAACCTGTA ATTTCCATTC AAAACCTCGA CCATTACTTT
GGTAGTGGAC AACTCCGCAA ACAGGTTTTA TTTAATATCA ACCTCGAAAT TAATGCAGGC
GAAATAGTGA TTATGACAGG GCCTTCCGGT TCTGGAAAAA CTACCCTACT AACTTTAGTT
GGTGGCTTGC GTTCAGCCCA GTCTGGTAAT TTGCGGATTT TAGGTAGTGA ACTCTGCGGT
GCTAGTAGTA AACAGTTGAC TCAAGCACGA CGCAACAACG GTTATATATT CCAAGCGCAT
AACCTACACG GTAGCCTAAC AGCACTGCAA AATGTGCGGA TGGGTTTGGA ATTGCAACCA
GGAATTTCCA CCCAAGAAAT GCTCACTCGC TCAACAGCAA TGTTAGAAGA AGTCGGCTTA
GGAAATCGGC TGAATTATTA CCCAGATAAC TTATCGGGAG GACAAAAACA AAGGGTAGCG
ATCGCTCGTG CTTTAGTCAG TCAGCCTAAA ATAGTCTTAG CTGATGAACC AACAGCCGCA
CTAGATAAAC AATCAGGGCG CGATGTCGTG GAATTAATGC AAAAATTAGC CAAAGAGCAT
CACTGTACAA TTCTGCTAGT TACCCACGAC AACCGCATTT TAGACATCGC TGATCGCATT
GTCTACATGG AAGATGGTCA TCTTGTCAAG GACGAGGTGA GTGTCAATAA ATGA
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| Protein sequence | MQSINTSEPV ISIQNLDHYF GSGQLRKQVL FNINLEINAG EIVIMTGPSG SGKTTLLTLV
GGLRSAQSGN LRILGSELCG ASSKQLTQAR RNNGYIFQAH NLHGSLTALQ NVRMGLELQP
GISTQEMLTR STAMLEEVGL GNRLNYYPDN LSGGQKQRVA IARALVSQPK IVLADEPTAA
LDKQSGRDVV ELMQKLAKEH HCTILLVTHD NRILDIADRI VYMEDGHLVK DEVSVNK
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