| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1218 |
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| Symbol | |
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| ID | 3683258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1501931 |
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| End bp | 1502914 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637716556 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_321737 |
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| Protein GI | 75907441 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTCT TTGTCACAGG GGCTACGGGT TTTGTGGGTG CCAATCTAGT GCGATTGCTG
CTGCAACAGG GGTACACAGT CAAAACCCTA GTCCGTCCTC AGAGCAATCT GGGTAATTTA
CAGGGTTTAG ATGTGGAAAT TGTCGAAGGG GATTTTGATA ATCAATACCT TTGGCGACAG
ATGTCTGGTT GTCGGTATCT GTTTCATGTC GCAGCCCAAT ACTCCCTGTG GCAAAAAGAC
CGGGATTTAC TTTATCAAAA CAACGTCCTC GGTACTTTTC AGGTGTTAGA AGCAGCCCAA
AAAGCGGGAA TTGAACGTAC TGTTTACACC AGTTCTGTAG CCGCCATTGG GGTAAATCCC
TCTGGTGCAA TTGCCGATGA AACCTATCAA AGCCCGGTAG ATAAGCTAAT TGGACATTAC
AAAAAATCCA AGTTTTTAGC AGAACAGGAA GCCGTACAGG CCGCAGCCAA GGGACAAGAT
GTGGTCATCG TTAACCCCAG CACCCCCATC GGCCCTTGGG ATATCAAACC CACACCCACC
GGCGACATTA TTCTCCGGTT CCTGCGGCGA CAAATGCCCG CCTATGTCAA TACCGGGCTG
AATTTAATCG ATGTGCGGGA CGTAGCTTGG GGACATTTAC TGGCCTTGGA AAAAGGGAAA
AGTGGCGATC GCTATATCTT AGGACATCAG AACCTCAGCC TCAAGCAACT ACTGGAGAAA
CTGGCAGAAA TCACAGGTTT ATCCGCACCC CAATGGACTG TCCCAGGCTG GTTACCCCTA
AGCGTCGCCT GGATGGAAGA AAAGATCCTC GCACCTTTGG GAAAACCTCC TTCAGTCCCT
ATAGATGGTG TCCGTATGGC TCAACAAACC ATGTACTACG ATGCCTCAAA AGCCGTCAAA
GAATTAGGTT TACCCCAATC TCCAGTCGAT ATTGCCCTGA AAGATGCGGT GAATTGGTTT
GTTTCCCAAG GTTACGTCAA GTGA
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| Protein sequence | MRVFVTGATG FVGANLVRLL LQQGYTVKTL VRPQSNLGNL QGLDVEIVEG DFDNQYLWRQ
MSGCRYLFHV AAQYSLWQKD RDLLYQNNVL GTFQVLEAAQ KAGIERTVYT SSVAAIGVNP
SGAIADETYQ SPVDKLIGHY KKSKFLAEQE AVQAAAKGQD VVIVNPSTPI GPWDIKPTPT
GDIILRFLRR QMPAYVNTGL NLIDVRDVAW GHLLALEKGK SGDRYILGHQ NLSLKQLLEK
LAEITGLSAP QWTVPGWLPL SVAWMEEKIL APLGKPPSVP IDGVRMAQQT MYYDASKAVK
ELGLPQSPVD IALKDAVNWF VSQGYVK
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