| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1198 |
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| Symbol | |
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| ID | 3683297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1477851 |
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| End bp | 1478987 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716535 |
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| Product | sigma 28 (flagella/sporulation) |
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| Protein accession | YP_321717 |
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| Protein GI | 75907421 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATTG CTGAATTGGG AACAATGGAA ATAATAGAAA GTGTTGTAGA ACATGAAGAA
CACTCTCTCG ATGCCTTAGA ACTGATAATA GAAGAAGAAC CCCCAATAAC AGACAATTTA
GACTCAGAGG AACGTGATAG CGGGGATGAA ATGGCTGCTG CCCGGCCTTC GGGCTACAAT
AAAACCGAGC ATGATGATGC AGTAGGTGCG TTCTTTAAAG AAATGGCACG TTATCCACTG
CTAAAACCCG ATGAAGAGGT AGAATTAGCC AGAAGAGTCA GATTTTTAGA AGAAGTTAGA
GATTTACAAG CAGATTTGCA ATTGCAACTA GGGCTACATC CAACAAAAGC CCAAGTAGCT
GCTCAACTAG AGATAACAGA AAAACAATTA GAAAATCGAT TGTATCAAGG TCGAGTGGCG
AAACGTAAAA TGATTCGCTC GAACTTGAGA TTAGTAGTAT CAATTGCCAA GCGTTATCTG
AATCGGGGAG TACCTTTTCT AGATTTAATT CAAGAAGGTG CAATGGGATT GAATCGAGCT
ACAGAGAAAT TTGACCCCGA TAAAGGATAT AAGTTTTCTA CTTACGCTTA CTGGTGGATT
AGACAAGCAA TTACGAGAGC GATCGCTAAT GATGCCAGAA CCATCCGCCT ACCCATCCAT
ATTGTAGAAA AACTCAACAA ACTCAAAAAA GCCCAACGGG AACTCAAACA AAAATTCAGC
CGCAACCCTT CCGAAGCAGA AATGGCCGAA GCTTTGGAAA TTAGCGTCCC CCAACTGCGC
CAACTGCAAC AACTCCGGCG ACAAGCCCTA TCTTTAAACC ATCGTGTCGG TAAAGAAGAA
GATACCGAAC TGATGGATTT ATTAGAAGAT GAGGATAACT TATCTCCGGA AGCAAAAATG
AACGAAAATA TGATGCGTCA GGAGATTTGG GAAGTTTTAG GTGATGTCCT CACTCCCAGA
GAAAAAGACG TAATTTCTCT ACGCTATGGT TTGACAACTA GCGAACCTTG CACCCTGGAG
GAAGTCGGAA ATATGTTCAA CTTATCCCGC GAACGAGTCC GCCAAATTCA AAGCAAAGCC
ATGCGTAAAT TACGCCGTCC TCACATAGCC AAACGTCTGA AGGGTTGGTT AATTTGA
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| Protein sequence | MNIAELGTME IIESVVEHEE HSLDALELII EEEPPITDNL DSEERDSGDE MAAARPSGYN
KTEHDDAVGA FFKEMARYPL LKPDEEVELA RRVRFLEEVR DLQADLQLQL GLHPTKAQVA
AQLEITEKQL ENRLYQGRVA KRKMIRSNLR LVVSIAKRYL NRGVPFLDLI QEGAMGLNRA
TEKFDPDKGY KFSTYAYWWI RQAITRAIAN DARTIRLPIH IVEKLNKLKK AQRELKQKFS
RNPSEAEMAE ALEISVPQLR QLQQLRRQAL SLNHRVGKEE DTELMDLLED EDNLSPEAKM
NENMMRQEIW EVLGDVLTPR EKDVISLRYG LTTSEPCTLE EVGNMFNLSR ERVRQIQSKA
MRKLRRPHIA KRLKGWLI
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