| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1197 |
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| Symbol | |
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| ID | 3683296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1474465 |
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| End bp | 1477014 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716534 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_321716 |
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| Protein GI | 75907420 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATTA ATGACATCAA TTCTCCCGAT TTAGTAGTGA ATGAAAATCA GGAATTCTAC
CGAGTAACAA CCAATAAAAA TCAGTATGTC GAAGTATTAG TAGACTTTCC TGGCAATTCA
GGATTATTCA CTTACCGAAT ACCAAGTCAG TTAGAAATCA GACCAGGAGA TATATTAAGT
GTACCTTTTG GCTCCCAGCA ATTGGGAGCG ATCGCTATTC GGTTATTGGC AGAACCCAAT
ATTGATCTAG CACAGGACAA GATACGGGAA GTGGAGGATG TAGTAACTTC TGGGTTTTTT
GCTAGTGCTT ATTGGGAATT ATTAAATAGA GTAGCGTCAT ATTACTACAC GCCTTTAATT
CAGGTAATCA GAGTAGCATT ACCACCAGGA TTATTGGGGC GATCGCAACG TCGCGTCCGC
TTGATCAAAA GACAAAATGA GCAACTATCA GTTGCTTTTT TAAGCCCCCC AGCACAGCAA
ATTCTTCAAT TACTACAATC CCAACCATCA GGAGATTATA GTTTCCATTA TTTGCAACAA
AAAGTTAAAG CTACTTATCG AGGGATGCGG GAATTATTAC GCATAGGTTT AGTAGAAAGT
TACTTAGAAC CGCCCCGGAC AAATCGCCCA AAACTGCAAA AAGCAGTCAT ATTAATTGAT
ACAGTTGACC GTGATTTAAC CAATCGCCAA AGGGAGATTT TGGAAGTATT GCGGAGACGG
GGCGGTGAGC TATGGCACAG TGAATTGTTA CAAATTTGTA GTACCAGTTC CTCTACCCTA
AAGTCGATGG AACAAAAAGG TTACATTGCT ATAGAAGAAC GAGAAGTATT GCGAACAGAA
CAAGGGCAAG TATTAGATTT AGATACACCG AAGTTATTAA ATATTGCTCA AGAGAATGCC
TTAGTAACTA TCCATCGGCT GAATGGATTT GCTCAAGTAT TGTTGCATGG GGTCACAGGT
TCAGGTAAAA CCGAAGTATA TTTGCAAGCG ATCGCTCCCA TACTCGCACA AGGCAAATCA
GCCCTAGTAT TAGTCCCAGA AATCGGCCTC ACACCCCAAC TCACCGACCG TTTCCGCGCC
CGTTTTGGCA ATAATAAAAT CAGCGTTTAT CACAGCGCCC TTTCCGACGG TGAACGTTAC
GACACTTGGC GGCAAATGCT CACAGGCACA CCCCAAATCG TCATCGGCAC ACGTAGCGCC
ATTTTCGCGC CTTTACCCAA CTTAGGCTTA ATTATCCTCG ACGAAGAACA CGACTCCAGC
TTTAAACAAG ATTCTCCCAT CCCCACCTAC CACGCCCGCA CCGTCGCCCA ATGGCGTGCA
GAACTAGAAA ACTGTCCCCT GGTTTTAGGT TCTGCCACAC CTTCCTTAGA AAGTTGGGTG
AGTGTGAGTC AAAATTCAAA ATTCAAAATT CAAAATTCAA AATTAACAAT TTCCTCATCT
CCCTCATCTC CCCCCAGTCC CCAGTCCCTC TACTCCCCTC TCCCCGAACG TATCAACTCC
CGCCCTCTAC CACCAGTAGA GATAGTTGAT ATGCGGCAAG AGTTACAGGA TGGGAATCGT
TCTATATTTA GTCGGTCATT ACAAGCAGCT TTACAACACC TGGAACAAAC GGGAAGACAG
GGGATTTTAT TTATTCATCG TCGGGGACAT AGTACCTTTG TGTCCTGTCG CAGTTGCGGC
TATGTAGTGG AGTGTCCTCA CTGTGATGTC TCCCTGGCCT ATCACCAAAC AGAAGTAGGC
GCGCCCCAGC TGTTGCGCTG TCATTACTGT AATTATGTAA GTGTGCATCC CAAACACTGC
CCAGAATGTA GTTCACCTTA CCTGAAATTT TTTGGTAGCG GTACTCAACG GGTTGCCCAG
GAATTAAGCC GACAGTTTCC GGGGTTAAAA TACATCCGCT TTGATAGTGA CACTACCCGC
AACAAAGGCG CACATCGTAC CCTACTGACT CAGTTTGCCA ATGGGGAAGC GAATTTATTA
GTGGGGACGC AAATGTTAAC TAAGGGGTTA GATTTGCCCC AGGTGACACT TGTGGGTGTT
GTTGCGGCCG ATGGACTGTT GAACTTGTCA GATTATCGCG CCAGTGAAAG GGCATTTCAA
ACCCTGACTC AGGTGGCTGG TAGGGCTGGC AGAGGTGATG ACCCTGGGAG GGTGATTATG
CAAACTTACA CGCCAGAACA TCCAGTAATT GAAGCAGTCA GGCATCACGA TTATCAATCT
TTTGTGCAAG CGGAATTAGA ACAACGGCAA GCCCTGAATT ATCCGCCTTA TGGCAGGTTA
ATTTTATTGC GGCTGAGTAG CTTCGATCCT ATACAAGTAC AGAATACAGC TGGTGCGATC
GCCACAGTAT TAAATGCTAA CCCAGGATTT GAATTATTAG GCCCAGCACC AGCTAGTGTG
ATGCGGGTAG CAAACCGTTA TCGCTGGCAG ATATTACTCA AGTTTGCCCC CGAAGCACTA
CCCCAATTAC CAGACTGGGA CGAAGTACGC CTACTTTGTC CTGATGGTGT CAGCTTAACT
ATAGATGTAG ACCCGTTAAA TATTATGTGA
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| Protein sequence | MYINDINSPD LVVNENQEFY RVTTNKNQYV EVLVDFPGNS GLFTYRIPSQ LEIRPGDILS
VPFGSQQLGA IAIRLLAEPN IDLAQDKIRE VEDVVTSGFF ASAYWELLNR VASYYYTPLI
QVIRVALPPG LLGRSQRRVR LIKRQNEQLS VAFLSPPAQQ ILQLLQSQPS GDYSFHYLQQ
KVKATYRGMR ELLRIGLVES YLEPPRTNRP KLQKAVILID TVDRDLTNRQ REILEVLRRR
GGELWHSELL QICSTSSSTL KSMEQKGYIA IEEREVLRTE QGQVLDLDTP KLLNIAQENA
LVTIHRLNGF AQVLLHGVTG SGKTEVYLQA IAPILAQGKS ALVLVPEIGL TPQLTDRFRA
RFGNNKISVY HSALSDGERY DTWRQMLTGT PQIVIGTRSA IFAPLPNLGL IILDEEHDSS
FKQDSPIPTY HARTVAQWRA ELENCPLVLG SATPSLESWV SVSQNSKFKI QNSKLTISSS
PSSPPSPQSL YSPLPERINS RPLPPVEIVD MRQELQDGNR SIFSRSLQAA LQHLEQTGRQ
GILFIHRRGH STFVSCRSCG YVVECPHCDV SLAYHQTEVG APQLLRCHYC NYVSVHPKHC
PECSSPYLKF FGSGTQRVAQ ELSRQFPGLK YIRFDSDTTR NKGAHRTLLT QFANGEANLL
VGTQMLTKGL DLPQVTLVGV VAADGLLNLS DYRASERAFQ TLTQVAGRAG RGDDPGRVIM
QTYTPEHPVI EAVRHHDYQS FVQAELEQRQ ALNYPPYGRL ILLRLSSFDP IQVQNTAGAI
ATVLNANPGF ELLGPAPASV MRVANRYRWQ ILLKFAPEAL PQLPDWDEVR LLCPDGVSLT
IDVDPLNIM
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