Gene Ava_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1186 
Symbol 
ID3683324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1457333 
End bp1458616 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content39% 
IMG OID637716523 
Productglycosyl transferase, group 1 
Protein accessionYP_321705 
Protein GI75907409 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTC TCATCTACTC CTACAATTAT TATCCAGAGC CAATCGGTAT TGCACCTTTG 
ATGACTGAAC TGGCAGAGGG TTTAGTAGAG AGAGGACATC AGGTGCGAGT GATTACAGGA
ATGCCTAATT ATCCTCAACG GGAAATTTAC GACGGATACA AAGGTAAGTG GTATGTTACA
GAACAAAAGA ATGGCGTAAC TATCCAGCGT AGTTACCTAC GAATTAAGTC TAAACCTAAA
TTAATAGATA GATTATTACT AGAGTTAAGT TTTATCTTCA CTAGCTTGCC ACAAGCTTTT
AACGGCGAAA GACCAGACTT AATTTTATTA ACAGTACCGC CACTTTTAGT TTCACTACCA
GCAACTCTGC TGGGATTGTT TTATAAGTGT CCCGTCGTGT TAAATGTGCA GGACATATTA
CCAGAAGCGG CTGTGCGCGT TGGATTGATG ACCAATAAAT TAATGATTCG CTTTTGCGAA
ATTATAGAAA AATTTGCTTA TAAAAATGCC ACTAAGATTA GCGTCATAGC CGAGGGCTTT
CGTGAGAATT TAATCAATAA GGGAGTAAGT GCTAAAAAAG TTCTTTGTAT TCCTAATTGG
GTGAATGTTA ATTTTGTCCG TCCCTTAGCT AAAAACAATT CGTGGAGAAC AGTTCATCAA
CTCGATGGCA AATTTGTTGT GATGTATTCT GGGAACATCG CACTAACGCA AGGTTTAGAG
ACAGTAATAG CCGCAGCCAC CTATTTGCGG CATATTCCAG ATATTAGTTT TGTCATTATT
GGTGAATCAA AGGCTTTATC TAGGTTACAG AAATATTGTC TCTCTTGTGG AGCAGATAAT
GTTCTACTCT TACCGTTGCA ACCAAGGGAA GATGTACCGC AAATGTTAGC AACGGCTGAT
GTTAACTTAG TTGTGCAGAA AGGCAACGTG ATTGCTTTTA ATATGCCTTC TAAGATCCCA
CTTGCATTAG CTTCTGGTCG TCCAATTATT GGTTCGGTTC CTGCAACGGG TACAGCAGCC
AAGGTGATTA AAGAAAGTGG TGGCGGTGTG ATTGTGGAAC CAGAATCACC GGAAGCGTTA
GCAGCAGCAG TATTGGATAT ATATAATAAT TCGACATTAG CGACAAAGTT AGGCAATCAA
GGTAGACGAT TCGCAGAAGA AAATTTCTCC TTTGAGCAAG CAATTGAGCA ATATGAGGAG
TTATTTTTTG AGTTATTGGG AAAGACGAAA CCGAAAATTA CTCGTTTAGC ACCATCTCAG
CAGAAAAAAT CTGTTAAGAT TTAA
 
Protein sequence
MHILIYSYNY YPEPIGIAPL MTELAEGLVE RGHQVRVITG MPNYPQREIY DGYKGKWYVT 
EQKNGVTIQR SYLRIKSKPK LIDRLLLELS FIFTSLPQAF NGERPDLILL TVPPLLVSLP
ATLLGLFYKC PVVLNVQDIL PEAAVRVGLM TNKLMIRFCE IIEKFAYKNA TKISVIAEGF
RENLINKGVS AKKVLCIPNW VNVNFVRPLA KNNSWRTVHQ LDGKFVVMYS GNIALTQGLE
TVIAAATYLR HIPDISFVII GESKALSRLQ KYCLSCGADN VLLLPLQPRE DVPQMLATAD
VNLVVQKGNV IAFNMPSKIP LALASGRPII GSVPATGTAA KVIKESGGGV IVEPESPEAL
AAAVLDIYNN STLATKLGNQ GRRFAEENFS FEQAIEQYEE LFFELLGKTK PKITRLAPSQ
QKKSVKI