Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1161 |
Symbol | |
ID | 3683356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1421472 |
End bp | 1423400 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637716497 |
Product | hypothetical protein |
Protein accession | YP_321680 |
Protein GI | 75907384 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000175319 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA TCACTATTCA GTGTCGTCTT GTAGCTTCTG AGCCATCACG TCATCAACTA TGGAAGTTGA TGGTAGATTT AAATACGCCA CTGATTAATG AATTATTGGT TCAGGTAGCC CAACACCCTG AATTTGAAAC TTGGCGACAA AAGGGCAAAC ACCCAGCCAA AATTGTCAAA GAATTATGCG AGCCTTTGAG AACTGATCCT CGCTTCATCG GTCAACCTGG ACGTTTTTAC ACAAGTGCGA TCGCCACAGT AAATTACATC TACAAATCTT GGTTTGCATT GATGAAGCGA TCGCAATCCC AACTAGAAGG TAAAATGCGC TGGTGGGAAA TGCTTAAAAG CGATGCCGAA TTAGTAGAAG TTAGTGGAGT TACTTTAGAG AGTCTTCGTA CTAAAGCTGC TGAAATACTG TCTCAATTTG CTCCCCAGCC AGATACAGTT GAAGCACAAC CAGCGAAAGG AAAGAAACGT AAGAAAACCA AAAAATCAGA TGGCGATTGC GCGGAGCGCA CGCTACGCGA ACGTAGTATT TCTGATTATT TGTTTGAAGC TTACCGCGAC ACAGAAGAAA TATTGACACG TTGTGCAATT AACTATTTAC TGAAAAATGG TTGCAAAATC AGCAATAAAG AGGAAAATGC TGAAAAATTC GCTAAACGCC GCCGCAAACT GGAGATTCAA ATTGAACGCC TAAGAGAAAA ACTAGAGGCA CGAATCCCCA AAGGTCGAGA CTTAACGGAT GCCAAATGGT TAGAAACTCT TTTGCTGGCC ACTCTTAATG TTCCTGAAAA TGAAGCGGAG GCGAAATCTT GGCAAGACAG TCTGCTAAAA AAATCTATCA CAGTACCTTT CCCAGTCGCT TATGAAACCA ACGAAGACAT GACTTGGTTT AAAAACGAAA GGGGACGTAT CTGTGTAAAA TTTAGCGGAC TGAGTGAGCA TACTTTTCAA GTCTATTGCG ATTCTCGCCA ACTCCAATGG TTTCAACGTT TTTTAGAAGA CCAGCAAATC AAACGGAACA GTAAAAACCA ACACTCTAGC AGCCTATTCA CTCTCCGTAG TGGACGTATT GCATGGCAAG AGGGGGAAGG TAAAAGTGAA CCTTGGAAAG TTAACCGCTT AATCCTTTAC TGTTCTGTAG ATACTCGCCT GTGGACGGCT GAAGGAACAA ACCTAGTCCG AGAAGAAAAA GCAGAAGAAA TTGCTAAAGC TATCGCCCAA ACAAAAGCCA AAGGCAAACT CAACGATAAA CAACAAGCTC ATATAAAACG GAAAAACTCT TCTCTAGCCA GAATTAATAA CCTCTTTCCC CGCCCCAGCA AGCCCTTATA TAAAGGTCAA TCTCATATTC TTGTTGGTGT TAGCCTTGGT TTAGAGAAAC CTACAACACT AGCAGTGGTT GATGGCTCTA TAGGTAAAGT GCTTACTTAC CGCAATATTA AACAACTACT AGGCGATAAT TACAGACTTT TAAATAGACA ACGACAACAA AAACACACCT TATCCCATCA ACGCCAAGTA GCTCAAATCC TGGCTTCACC GAATCAACTT GGGGAATCAG AGTTGGGACA GTATGTAGAC AGATTACTAG CTAAAGAAAT TGTAGCGATC ACCCAAACAT ATAAAGCTGG CTCTATTGTC CTGCCTAAAT TGGGCGATAT GCGAGAACAG GTGCAAAGTG AGATTCAAGC TAAAGCCGAA CAGAAATCAG ACTTAATAGA AGTTCAACAA AAATATTCCA AACAGTACCG AGTTAGCGTC CATCAGTGGA GCTATGGTCG ATTGATTGCA AGTATTCGCT CGTCAGCAGC TAAAGTTGGA ATTGTGATTG AGGAATCGAA ACAACCGATT CGAGGTAGTC CACAGGAGAA AGCGAGAGAA TTAGCGATCG CTGCTTATAA TTCTCGCCGA AGAACCTGA
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Protein sequence | MSQITIQCRL VASEPSRHQL WKLMVDLNTP LINELLVQVA QHPEFETWRQ KGKHPAKIVK ELCEPLRTDP RFIGQPGRFY TSAIATVNYI YKSWFALMKR SQSQLEGKMR WWEMLKSDAE LVEVSGVTLE SLRTKAAEIL SQFAPQPDTV EAQPAKGKKR KKTKKSDGDC AERTLRERSI SDYLFEAYRD TEEILTRCAI NYLLKNGCKI SNKEENAEKF AKRRRKLEIQ IERLREKLEA RIPKGRDLTD AKWLETLLLA TLNVPENEAE AKSWQDSLLK KSITVPFPVA YETNEDMTWF KNERGRICVK FSGLSEHTFQ VYCDSRQLQW FQRFLEDQQI KRNSKNQHSS SLFTLRSGRI AWQEGEGKSE PWKVNRLILY CSVDTRLWTA EGTNLVREEK AEEIAKAIAQ TKAKGKLNDK QQAHIKRKNS SLARINNLFP RPSKPLYKGQ SHILVGVSLG LEKPTTLAVV DGSIGKVLTY RNIKQLLGDN YRLLNRQRQQ KHTLSHQRQV AQILASPNQL GESELGQYVD RLLAKEIVAI TQTYKAGSIV LPKLGDMREQ VQSEIQAKAE QKSDLIEVQQ KYSKQYRVSV HQWSYGRLIA SIRSSAAKVG IVIEESKQPI RGSPQEKARE LAIAAYNSRR RT
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