Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1150 |
Symbol | |
ID | 3683404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1407584 |
End bp | 1409266 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637716486 |
Product | integrase catalytic subunit |
Protein accession | YP_321669 |
Protein GI | 75907373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.204343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATG ATCCTGATAA GGGCAATCAA GAGCCAGAAA CGCATGAGAT AGTGACTGAG CTATCACTAG ATGAGCAGCA TTTGCTGGAA ATGATTCAGA AACTAATAGA ACCGTGCGAT CGTATCACCT ATGGAGAAAG ACAAAGGGAA GTTGCAGGAA AACTAGGCAA GTCTGTACGG ACAGTAAGGC GATTGGTGAA AAAATGGGAA CAGGAGGGTT TAACTGCACT TCAAACTGCG ACAAGAACTG ATAAAGGAAC ACATCGAATA GATTCGGATT GGCAGGACTT CATTATCAAG ACATATAAGG AAAATAATAA AGATGGAAAA CGAATGTCTC CCAAACAAGT GGCGCTCAGA GTTCAAACAA AGGCTGAGGA ATTAGGTCAA CAAAAATATC CCAGTTATAG AACTGTGTAT CGAGTTTTAC AACCTATCAT CGAACAGAAA GAACAAAAAG AGGGTATTAG ACATCGGGGT TGGCATGGTT CTCGATTATC AGTTAAAACT CGCGATGGCA AAGACTTATT TGTGGAACAC AGCAATCATG TTTGGCAGTG TGATCACACT CGTGTAGACC TATTACTGGT AGATCAGCAC GGTGAACTTT TGAGTCGTCC TTGGTTAACA ATAGTTGTAG ATACTTACTC CCGTTGCATT ATGGGGATAA ATTTGGGTTT TGATGCCCCA AGTTCCCAGG TAATAGCATT GGCACTGCGT CATGCAATTT TGCCTAAGCG ATATGGATCA GAATATGGAC TCCATGAAGA ATGGGGAACC TATGGTAAAC CAGAACATTT TTATACTGAT GGCGGTAAAG ATTTTCGCTC CAACCATTTG CAACAGATAG GTGTGCAGTT GGGGTTTGTT TGTCATTTAC GCGATCGCCC CAGTGAAGGT GGTATTGTTG AGCGTCCTTT TGGAACTTTT AACACTGATT TATTTTCAAC CTTGCCAGGA TACACAGGTT CAAATGTACA GGAACGCCCT GAGCAAGCTG AGAAAGAAGC TTGTATTACT TTGAGGGAAT TAGAACGTCT GCTAGTACGT TACATCGTGG ATAAATACAA CCAAAGTATT GATGCTCGAT TAGGCGACCA AACTCGTTAT CAACGTTGGG AAGCAGGATT AATTGTTGCG CCTAATTTAA TTTCAGAAGA AGAATTACGT ATCTGCCTGA TGAAGCAAAC TCGACGCTCA ATTTACAGGG GTGGGTATGT GCAATTTGAA AATCTGACTT ATCGGGGAGA AAATTTGGCA GGTTATGCAG GTGAAAATGT TGTACTGCGT TATGACCCCA AAGATATCAC CACTTTGTTG GTTTACCGCC AGAAAGGTAA TCAAGAAGAA TTTCTAGCTC GTGCTTATGC TCAAGATTTG GAGACAGAGG AATTGTCTGT GGATGAAGCA AAAGCTATGA GTCGCCGGAT TCGGCAAGCA GGTAAGGCTA TTAGCAATCG TTCTATTTTG GCAGAGGTGC GCGATCGCGA AACCTTCGTG AACCAAAAGA AAACCAAAAA GGAACGCCAA AAGGCAGAAC AGACCATAGT TCAAAAGGCT AAAAAACCTG TGCCTGTTGA ACCAGAGGAA GAAATTGAAG TGGCATCTGT TGACAGTGAA CCAGAATACC AGATGCCGGA AGTCTTTGAT TACGAACAAA TGCGTGAAGA TTACGGGTGG TAG
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Protein sequence | MLDDPDKGNQ EPETHEIVTE LSLDEQHLLE MIQKLIEPCD RITYGERQRE VAGKLGKSVR TVRRLVKKWE QEGLTALQTA TRTDKGTHRI DSDWQDFIIK TYKENNKDGK RMSPKQVALR VQTKAEELGQ QKYPSYRTVY RVLQPIIEQK EQKEGIRHRG WHGSRLSVKT RDGKDLFVEH SNHVWQCDHT RVDLLLVDQH GELLSRPWLT IVVDTYSRCI MGINLGFDAP SSQVIALALR HAILPKRYGS EYGLHEEWGT YGKPEHFYTD GGKDFRSNHL QQIGVQLGFV CHLRDRPSEG GIVERPFGTF NTDLFSTLPG YTGSNVQERP EQAEKEACIT LRELERLLVR YIVDKYNQSI DARLGDQTRY QRWEAGLIVA PNLISEEELR ICLMKQTRRS IYRGGYVQFE NLTYRGENLA GYAGENVVLR YDPKDITTLL VYRQKGNQEE FLARAYAQDL ETEELSVDEA KAMSRRIRQA GKAISNRSIL AEVRDRETFV NQKKTKKERQ KAEQTIVQKA KKPVPVEPEE EIEVASVDSE PEYQMPEVFD YEQMREDYGW
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