| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1143 |
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| Symbol | |
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| ID | 3683397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1400667 |
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| End bp | 1402421 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716479 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_321662 |
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| Protein GI | 75907366 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0908627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00528068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAAAAATA TTGACTTAGG CAGGAATGAT GCCCGAATTA AAGCAAAATT TCCCTGTCCC
AGATTATTTC TGCTACTAAC CTTAATTAGC TTTCCTGGTG TTGCGTCTGC CCAATCTACA
CCACCGGCAG GGGTGACAAT TCCCCCTACT ACACCAGAAA CTATCGACCA AACTATCCCT
AAACCCTCCC CTATTCCCAC TGTTCCTACT CCCCCTTCTC CTACCACACC TATTCTTCCT
GTGCCTCCTG TGCCAACACC ATCGGATGTT ACTTCTCCTA CTGGTGAAAG CTTTTTAGTG
ACCAAAATTG AAGTTTTGGG GTCTACAGTC TTAAAAAATG AAATCGCCAA GTTGATTAAA
CCATTCGAGA ACCGTCGAGT TACTTTTGCA GATTTAATTC AACTACGCTC AGATATTACC
GAACTTTATA TTGAAAACGG CTACATCACC AGTGGCGCAT TTTTACCCAA CAATCAAAAT
CTGACTGATG GTGTGGTAAA AATTCAGGTG GTGGAAGGAG AACTAGAGAA AATTGAGATT
ACTGGGTTAA GAAGTCTTCA ATCAGTATAC GTGCGATCGC GTCTCGCCAA AGCTACCTCC
ACGCCATTAA ATCGCCAACG CATAGAAGCA GCATTGCAAC TATTACAACT AGACCCCGTG
ATTCAACGGG TAAATGCTGA GTTAACTGCT GGCAGTACTT CTGGTAGTAG TATCTTGCTA
GTAAATATCA CCGAAGCACC AGCATTTCAT AGGGGAGTTT TTACAGCCAA TAACCAAACT
CCCAGTATTG GTTCGACTCA ACTAGGGGTA TTTTTGAATC ATGATAACTT GCTCGGTTTT
GGCGATCGCC TCGCTGCCGA ATATACAATT ACTGAAGGAC TTAACTTGTA TGATGTCAGC
TATACAATTC CGGTAAACGG CAATAATGAC ACATTGAGTT TTCGGGTAAA TAATGCCAAT
AGCCACATTA TTACAGATGA TTTCCGCGAT TTGGACATTA GAAGCGAAAC TCAAACCTAT
TCCCTCAGTT ATCGTCATCC TCTCTACCGC CAACCCCAAA CAGAACTTGC CCTGAGTTTA
GGCTTAGATT TACGTCGTTC GCAAACATTT CTCCTCGATA ATATCCCTTT TTCTTTTTCT
CCTGGTGCGG AGGATGGAGA ATCAAAAATT ACCGCCATTC GTTTTTCTCA AGATTGGGTA
AAACGAGATT CCACAAGTGT TTTAGCAGCT CGCTCCCAAT TTAGCCTTGG TATTGGCGCT
TTTGATGCTA CAGTCAACGA CACTGATACG GATGGGCGCT TCTTTTCTTG GTTAGGACAA
TTTCAATGGG TGCAGTTATT ATCTTCACGA ACATTAATCC TCACTAGAGT CAATGCCCAA
CTGACGGGAG ATGCTTTATT ATCATTAGAA AAATTTAGTA TTGGTGGGTT TGATACAGTT
CGTGGTTATA CTCAAAACAA ACTCGTAGCC GACAATGGTT TTACGGCTTC TGTGGAAGTT
CGTCTTCCCT TAACTGCTAA CTCTAATGCT TTGCAGATAG CACCTTTTTT TGATATTGGT
ACTGTGTGGA ATAATCGCGG TAGTAATCCC CAACCACAGA CAATCTCCAG TCTCGGTTTA
GGCTTGCTTT GGCAACCAAG TCGAGATTTA AACCTACGTT TAGATTATGG TATTCCCTTA
ACGAATGTTA ACTATAGCGG AAACACACTG CAAGAAAATG GTCTTCACTT TTCACTGCGT
TATCAACCAT TTTAA
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| Protein sequence | MKNIDLGRND ARIKAKFPCP RLFLLLTLIS FPGVASAQST PPAGVTIPPT TPETIDQTIP
KPSPIPTVPT PPSPTTPILP VPPVPTPSDV TSPTGESFLV TKIEVLGSTV LKNEIAKLIK
PFENRRVTFA DLIQLRSDIT ELYIENGYIT SGAFLPNNQN LTDGVVKIQV VEGELEKIEI
TGLRSLQSVY VRSRLAKATS TPLNRQRIEA ALQLLQLDPV IQRVNAELTA GSTSGSSILL
VNITEAPAFH RGVFTANNQT PSIGSTQLGV FLNHDNLLGF GDRLAAEYTI TEGLNLYDVS
YTIPVNGNND TLSFRVNNAN SHIITDDFRD LDIRSETQTY SLSYRHPLYR QPQTELALSL
GLDLRRSQTF LLDNIPFSFS PGAEDGESKI TAIRFSQDWV KRDSTSVLAA RSQFSLGIGA
FDATVNDTDT DGRFFSWLGQ FQWVQLLSSR TLILTRVNAQ LTGDALLSLE KFSIGGFDTV
RGYTQNKLVA DNGFTASVEV RLPLTANSNA LQIAPFFDIG TVWNNRGSNP QPQTISSLGL
GLLWQPSRDL NLRLDYGIPL TNVNYSGNTL QENGLHFSLR YQPF
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