| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1097 |
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| Symbol | |
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| ID | 3678512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1335528 |
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| End bp | 1338656 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716433 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_321616 |
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| Protein GI | 75907320 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter
[TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.610594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCT CTTCGTCGTT AAGAGTTCAG GGAGGGCTGC AAAAAGATCC CAGTGATCAG
CTATCTCCCA CTCCAGAAGT GGCTATCCTC AATCTTTTGA GGTTAGTTGC AGGGGATACG
AGTCTAGTTT CAGAGTTGAG CCAAAACTGG GTAGTTCGTG AGTTTCAACT AGGTGATGAA
CTGGCAAATT ATGTTGTAGA TGCAGCAACT ACAGATAGTA GTAATGTTAT TTACTTAGTT
TGTCAAGGCA GAGTTCGTTT ATTAGGGTTT AATCAAACTC TGGGGCGAGA AGTTTCCACT
CAATTGGTGT CGGCTGAACA AACTTTTGGG GCAGATCATT TCTTTTGTCA GCAAACATTA
CCATATCGAG CGATCGCCGC TAGTGATGGC TTTGTTCTTT CTACGACAAT TGCTGAATTA
AAACCTTGGT TACAGGCTAT CCCCCAACTC AAAAATTACT TGCAGCGCTT AACCAGTGAA
CGCCAAACAC TGATATTTTT TAAAATTTAT ACTAAATTAC ATTCTCTCAA GAGTAAAAAA
CTCCAAGAAT TACTACCTTA TTTAATCGCT AAACACATCC CGAACGGCAC AACCTTATCA
GAAGCAACTC CACCGGAAAA AGGACGTTTT TGGCTAGGGA GTGGTCAAGT ACAATCAATA
TCAATAGCAA GTTTTTTGCC AGTGGTGGGG GATAGTTGGG GATATCCCGA ATCCACCTTA
CCAGATGGAA CAGCGCAGAC AGATTTGCTA GTTTACCAAC TGTCTGTGGA AAATTGGGAT
TTGGCAAGAG CGATCGCTCC CGATTACTTT ACTGAAAGCT ATCAACCAAT AGAACCACCT
GTAGAGGTGG TTAATGTTAT CCCGACTGAT AGTAAACCAC AAATAGCTTT ACCCAAGTTG
CAGAATTTAC GATCGCCTAC AGCGCCAGCC ACATCCGACA TCGAAGATAT CGACTTTCCC
CAAGGAGTCA AACAACACAA ATCACGGTCG TCCTACTCCT ACCCATTTAT TCAACAACAA
AGTTCATCAG ACTGTGGTGC AGCTTGTTTG GCGATGATTA GCCAATATTG GGGTAAGCGC
TTAAGTCTGT ATAGTTTGAG GAATTTAGCC CAGGTAGACC GTACTGGCGC ATCTCTTGAA
GGTTTGACAG TAGCAGCCCA AACCTTGGGT TATGATGTGC TAGCAGTGCG GGGAAGCTTG
CAGAAATTAG AGTGGCACTA TAACCCTTGG GTTGCCCACT GGCAAGGAAA TCACTATGTA
GTAGTGTGGC AGATTAAAGG CGATCGCATC CTGATTTCTG ACCCGGCTGT AGGTAGGAAA
TGGCTGTCAC GTCCGCAATT TGAAACGAGT TGGACAGGCT ACGCCCTATT ATTAGACCCC
ACAGAACGTT TTCAAGCCCT CAAAAGTGAA AAATTTTCTC TTGGTCGCTA TGGGCAAACA
TTGTGGAATT ATCGGACAGT ACTTAGGCAA ATAATTCTGG CCTCCTTATT GGTACAAGTT
TTTGGATTGG CAACTCCCCT GTTTACTCAG GTGATTCTCG ACCAAGTCAT GCCTATCAAA
AACTTGCCGA ATTTGCATAT ATTTGCGTTC AGCTTTTTAT GTTTGGGTAT CTGGCGGACT
GTGTTAACGA CACAACACCA ACACTTACTA GATTATTTTG CTAACCGCAT AGATTTAAAC
TTGATTGGCA ACTTTATTAA CTATACGTTG CAGTTACCCT TACAATTTTT CGCCTCCCGC
CAGGTAGACG ACATTATTAG CCGCGTTCAA GAAAACCGGA AAATTCAACT GTTTATTAGC
CGTAGGGCAA TTGCGGCGGC GGTAGATATG TTGATGGTGG TGACTTATCT GGGGTTGATG
ACCTATTACA GTTGGCAACT CACTCTTTTA GTTTTGAGTT GGATCATCCC CGTAGTGATT
TTAACTGTAG TTGCCAGCCC CTATCTCAAG CAAGCATCAA GAGAAATTTC TCAGGAATCC
GCCAGACAAC ACTCCTCAAT GGTAGAGATG ATGACTGGGG TAGCGACAGT CAAAACAGCC
ACCGCCGAAC GTCCTTTGCA GAAGTATTGG GAAGAACGGT TTTTAAAAAT GTTAAAGGCG
CGGTTGCGGG GACAAAAGTT AGCCCATCGT TTACAAGTGA CGCGGACGTT AATTAATCAC
GTTGGTAGCA CCCTGGTTTT ATGGTTTGGG GCTACTTTGG TGATGGGTGG GAAAATGTCC
TTGGGACAGT TTGTGGCTTT CAATATGCTG ACTGGAAATG TGACTCATCC AGTTTTGTCA
TTAGTTGGGT TATGGGATGA GTTTCAAGAA ATCTTGATTT CCGTGGAACG ACTCAATGAT
GTTTATGCGG CTGTCCCAGA AGCCAGTTCT CAAACAACTT TACTTGTGAT GCCGCCAATT
CGGGGCGAAG TACGATTTGA GAATGTATCG TTTCGTTATA ACTCGTTTCA AGAACGCAAC
GCCTTACAAA ATATCTCTTT TGGAGTCAAA CCCCAACAAA CTATCGGTAT TATTGGCCAA
AGTGGTTCGG GTAAAAGTAC TTTAGCCAAT TTATTAGCGG GTTTATATCG CCCTGATACA
GGCAGAATTT TGATTGATGG ACATGATATG GCTGGGGTGT CGCCCCAATC CTGGCGGACT
CAGGTGGGGT TAGTAGCACA AGACAGTTTT CTCTTTTCGG GAACGATTTT AGAAAACATT
ACTTTGCACG ATCAAGAACT GAGTTTAATC CAAGCGATCG CCGCCGCCAA GTTATCCGGC
GCACACGATT TTATCCAAGC CTTACCTCTG GGTTACGATA CCCCAGTGGG AGAACGAGGT
TTCATGCTTT CTGGGGGACA AAGGCAAAAA ATTGCGATCG CCCGTGCTTT GGTGAGAAAT
CCCAAAATTT TGATTTTAGA TGAAGCCACT AGCGGTTTAG ATGCAGAATC AGAACGCCGC
TTTCAACAGA ATTTAACCCA GATTAGTCAA GAACGCACTA CTTTTATAGT TTCTCACCGT
CTTTCCACTG TGCGCTATGC TGACCATATT TTTGTCATAG ACCAAGGAAT GGTGATTGAA
CATGGCACTC ATCAAGAACT AATGGCGATC GCTGGTCTTT ATCACCACTT AGCTCAACTG
CAACTATAG
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| Protein sequence | MNPSSSLRVQ GGLQKDPSDQ LSPTPEVAIL NLLRLVAGDT SLVSELSQNW VVREFQLGDE
LANYVVDAAT TDSSNVIYLV CQGRVRLLGF NQTLGREVST QLVSAEQTFG ADHFFCQQTL
PYRAIAASDG FVLSTTIAEL KPWLQAIPQL KNYLQRLTSE RQTLIFFKIY TKLHSLKSKK
LQELLPYLIA KHIPNGTTLS EATPPEKGRF WLGSGQVQSI SIASFLPVVG DSWGYPESTL
PDGTAQTDLL VYQLSVENWD LARAIAPDYF TESYQPIEPP VEVVNVIPTD SKPQIALPKL
QNLRSPTAPA TSDIEDIDFP QGVKQHKSRS SYSYPFIQQQ SSSDCGAACL AMISQYWGKR
LSLYSLRNLA QVDRTGASLE GLTVAAQTLG YDVLAVRGSL QKLEWHYNPW VAHWQGNHYV
VVWQIKGDRI LISDPAVGRK WLSRPQFETS WTGYALLLDP TERFQALKSE KFSLGRYGQT
LWNYRTVLRQ IILASLLVQV FGLATPLFTQ VILDQVMPIK NLPNLHIFAF SFLCLGIWRT
VLTTQHQHLL DYFANRIDLN LIGNFINYTL QLPLQFFASR QVDDIISRVQ ENRKIQLFIS
RRAIAAAVDM LMVVTYLGLM TYYSWQLTLL VLSWIIPVVI LTVVASPYLK QASREISQES
ARQHSSMVEM MTGVATVKTA TAERPLQKYW EERFLKMLKA RLRGQKLAHR LQVTRTLINH
VGSTLVLWFG ATLVMGGKMS LGQFVAFNML TGNVTHPVLS LVGLWDEFQE ILISVERLND
VYAAVPEASS QTTLLVMPPI RGEVRFENVS FRYNSFQERN ALQNISFGVK PQQTIGIIGQ
SGSGKSTLAN LLAGLYRPDT GRILIDGHDM AGVSPQSWRT QVGLVAQDSF LFSGTILENI
TLHDQELSLI QAIAAAKLSG AHDFIQALPL GYDTPVGERG FMLSGGQRQK IAIARALVRN
PKILILDEAT SGLDAESERR FQQNLTQISQ ERTTFIVSHR LSTVRYADHI FVIDQGMVIE
HGTHQELMAI AGLYHHLAQL QL
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