| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1061 |
|---|
| Symbol | |
|---|
| ID | 3678574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1291725 |
|---|
| End bp | 1293314 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637716397 |
|---|
| Product | cobalamin B12-binding |
|---|
| Protein accession | YP_321580 |
|---|
| Protein GI | 75907284 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000412719 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000367319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC TACTGCTCTA TCCTCGGTTC CCTCAGTCTT TTTGGTCTTA TGACCGCTTT
ATCGAAATTG CTGGACTCAA AGCTCTCTTG CCCCCATTGG GAATTATTAC AGTTGCAGCA
CTGCTACCCA AGAACTGGGA AATTAAATTT TGCGATCGCA ACGTCAATCC GGAAACAGAA
GCTGATTGGG AGTGGTGTGA CCTCGTTATC CTTTCGGCAA TGCTAGTGCA GAAACCAGAT
TTTCATGCCC TAATTCAAAA AGCAGTACGC TTAGGCAAAA AAGTAGCAGT CGGTGGCCCT
TACCCAACAT CAATACCACA AGATGCCTTG AACTCTGGAG CGCATTATTT GATTTTGGAT
GAGGGCGAGT TGACAGTTCC TCAGTTTCTG GAAGCCCTCA ACCAAGGTCA AGAACAAGGA
ATCTTTCGCT CTCTAGAAAA ACCTGATGTT AGCCAAAGCC CGATGCCCCG TTTTGACTTG
CTACAACGGG ATGCTTACTT GATGATGGCT ATCCAGTTTT CTCGCGGTTG CCCCTTTAAC
TGCGAGTTTT GCGATATTAT TACGCTCTAC GGTCGCAAAC CACGTACAAA AGAGCCTCAG
CAAACTATAG CTGAGTTGGA GGCTCTTTAT GATTTAGGCT GGCGAGGGTC ACTGTTCATA
GTTGATGACA ACTTTATTGG CAATCAGCGT AACGTCAAAC GCCTCCTGCG AGAGTTAATT
CCTTGGATGA AGCAGCACAA CTATCCCTTC ACCTTCATCA CAGAAGCTTC TGTGAATCTG
GCCGAAGATG AAGAAATGCT GCAATTAATG AGTGAAGCAG GTTTTTATGC AGTTTTTCTT
GGCATAGAAA CTCCTGACCA AGATAGTTTG CAAGTCACAC AAAAACTGCA AAACACTCGC
AATCCACTTG TAGAAGCCTG TCGTAAGATC AATGAAGCAG GAATGCTGAT TTATGCAGGG
TTTATCCTTG GTTTTGATGG AGAACGCCCA GGAGCAGGAG AACGAATTCA AGCTTTTGTA
GAACAAACGA GTATTCCTCA ACCGATGTTG GGTATCCTTC AAGCTTTGCC CAATACTGCT
TTGTGGACTC GTCTGCAAAA AGAGGAGCGT TTATTAGAGA ATCAGGGTGT TGGTGGTACT
GAAGTGGGAG ACCAAAATAC CTTAATGAAT TTCATTCCCA CCCGCTCCAT CGATGCGATC
GCTAGAGAGT ATGTAGACGG CTTGTGGACA TTATACGAAC CCAGCAACTA TCTCCGGCGA
TGTTTTCAGC AATGTCTGAG TATTGGCGTG CCTTCAAAGC GAAAGCAAAC CATGCAATTT
TCTCCAGGTA AGGGATTGCG GCTCGTTGCT CAGTTAATTT GGCATCAGGG CTTACGACGA
CCGGAAATTC GCTGGCAGTT TTGGCAACAA CTCTGGACGA TTCTGGTGAA AAAGCCTCAA
GTTCTCAATA TGTATTTAGG TCTATGCGCT GCGGGAGAAC ATTTTTGGGA GTACCGTACT
TTAGCTAGGG AACGGATTAC TCAACAATTA GGCTACGACC CCCTGAAAGT CTCTGTGTTA
CCTAAGCCAG AACTGATGCT GACCAAATAG
|
|---|
| Protein sequence | MKALLLYPRF PQSFWSYDRF IEIAGLKALL PPLGIITVAA LLPKNWEIKF CDRNVNPETE
ADWEWCDLVI LSAMLVQKPD FHALIQKAVR LGKKVAVGGP YPTSIPQDAL NSGAHYLILD
EGELTVPQFL EALNQGQEQG IFRSLEKPDV SQSPMPRFDL LQRDAYLMMA IQFSRGCPFN
CEFCDIITLY GRKPRTKEPQ QTIAELEALY DLGWRGSLFI VDDNFIGNQR NVKRLLRELI
PWMKQHNYPF TFITEASVNL AEDEEMLQLM SEAGFYAVFL GIETPDQDSL QVTQKLQNTR
NPLVEACRKI NEAGMLIYAG FILGFDGERP GAGERIQAFV EQTSIPQPML GILQALPNTA
LWTRLQKEER LLENQGVGGT EVGDQNTLMN FIPTRSIDAI AREYVDGLWT LYEPSNYLRR
CFQQCLSIGV PSKRKQTMQF SPGKGLRLVA QLIWHQGLRR PEIRWQFWQQ LWTILVKKPQ
VLNMYLGLCA AGEHFWEYRT LARERITQQL GYDPLKVSVL PKPELMLTK
|
|---|
| |