Gene Ava_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1060 
Symbol 
ID3678573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1290899 
End bp1291492 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID637716396 
Producthypothetical protein 
Protein accessionYP_321579 
Protein GI75907283 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000122836 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000222645 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAACTC TCACCCTCAA CGTACCACCA GCCGTAGGTT TAACGGATGA GCAGTTTTAT 
CAACTGTGCA TAGCCAATGA CGAATGGCGA ATTGAATTGA CGGCGGAAGG AGAATTAATC
ATTATGCCCC CAACAGGCGG CGAAAGCGGT ATTAGAAACG CTAATTTAAC AACAGATTTA
AACTTATGGA ATCGACAAGC TAAATTGGGT AAAGTATTTG ATTCATCAAC AGAATTTCGC
TTACCAAATG GTGCTTTCCG TTCTCCTGAC GCGGCTTGGG TAAAATTAGA ACGTTGGGAA
GCGTTGACAA GTGAACAAAA GCGCCGCTTT CCGCCATTGT GTCCCGATTT TGTGATTGAA
CTGCGATCGG AAACTGACTC TTTAAAAAAA TTGCGCGCCA AAATGCAGGA GTATCGGGAT
AATGGCGCTC GTTTGGGTTT CCTCATTGAC CCACAAACAC CCTTAGTAGA AATTTATCGC
TCTGATGCTG AGGTAGAAAC AATCAATTTT TCTGCTAACC AACCGCCCCA ACTTTCCGGT
GAAGATGTCT TACCTGGGTT TATTTTGGAT TTGGCTCTCA TTCTCAATCC ATAG
 
Protein sequence
METLTLNVPP AVGLTDEQFY QLCIANDEWR IELTAEGELI IMPPTGGESG IRNANLTTDL 
NLWNRQAKLG KVFDSSTEFR LPNGAFRSPD AAWVKLERWE ALTSEQKRRF PPLCPDFVIE
LRSETDSLKK LRAKMQEYRD NGARLGFLID PQTPLVEIYR SDAEVETINF SANQPPQLSG
EDVLPGFILD LALILNP