Gene Ava_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1058 
Symbol 
ID3678571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1288316 
End bp1289086 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content42% 
IMG OID637716394 
Producthypothetical protein 
Protein accessionYP_321577 
Protein GI75907281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.05542e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.33406e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAACTTC TTGAATTCCC CAATATTGCC ATCATTGCCG GAGAAAACGC TGTTCCTGTT 
GCTCAACTAC CTCTTGTATG GCAAGACATC GCTAAAGGTA CAGCCAATGT GGGACTCTGC
AATCCCCAAA TTTATGTGGA GATGGCGCAG TTATTCTTAT ACAAGTTAGA ACAAGGTGAC
GTTGATTTGT TTAATGAACG TCCAGAGTTA GCACACCTCA AGTCATCATT TTGTCAGTTA
TTTGGACAAC TAGGACGAGA AACTTTGGAG TTCTATGGTT ATGATTTCAT GACTCATAAC
TATCCCAACT TTGAAGAAAT TCTGCGGGAA GTGGAATCGA AAGATGCTGA TTACGGGAAA
GTTGCGCGGA TTGGTTTAGA ACTATTCCAA GAATTTGGTT ACGAACTACC AGCAAGTTTT
TATCATGTGC ATCTAGCACC GATTTACCGA GATCATGTGT TTGAGGAACG TGCCTTGAGA
TTTGATAAGC GGGATATTGA ACACAAGCGT TCTTGGGATG CCATCCTTCA TGCTGGTAAA
GTATTTGCCG TGCAAATGAA GGTGCAGAGT ATCGCCTCCA AGTATGGTTT TACTTATCAG
CATGGTTGCG GTTGTAACTC TCACCTATCA TCCATTGATG AATCTCGTGG CACCTTTGCT
TATGAATTGA GCCAAGAAAA ACGCGATCGC TGGATTCGCA GTTTTATCTG GACTGCTTGG
TATGAGTATG CCTTTTTTCC CATTGTACCA AATACAAGTT ATCTAGTTTA A
 
Protein sequence
MQLLEFPNIA IIAGENAVPV AQLPLVWQDI AKGTANVGLC NPQIYVEMAQ LFLYKLEQGD 
VDLFNERPEL AHLKSSFCQL FGQLGRETLE FYGYDFMTHN YPNFEEILRE VESKDADYGK
VARIGLELFQ EFGYELPASF YHVHLAPIYR DHVFEERALR FDKRDIEHKR SWDAILHAGK
VFAVQMKVQS IASKYGFTYQ HGCGCNSHLS SIDESRGTFA YELSQEKRDR WIRSFIWTAW
YEYAFFPIVP NTSYLV