| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1023 |
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| Symbol | |
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| ID | 3678691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1238240 |
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| End bp | 1239115 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716359 |
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| Product | putative lipid kinase |
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| Protein accession | YP_321542 |
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| Protein GI | 75907246 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0947788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCC GCGCACTGCT ATTAGTAAAT CGTCATGCCC GCCAAGGACA AGCGCGTCTA
TTGGAGGCAA TTAATCATCT GAAGAAATTT AATTTTCAGT TAATCGAAGA ATCAACAGAA
CATCCTAAGC ACCTTTCTCA AGTTATACAT AAGTATAAAT ATCAAGTCGA TTTAGTCATA
GTTGGAGGGG GTGATGGTAC ATTAAATGCT GTTGTTGATG CTTTAGTAGA AACACAATTA
CCTTTAGGAA TTTTACCACT AGGAACTGCT AATGACTTAG CTAGAACACT AGGAATTTCT
AACTCATTGC CCGAAGCTTG TAGAACAATT GCCGAAGGAG AATTAAGACG TATTGATTTA
GGTTGGGTAA ATGGTAAACA CTTTTTTAAT GTTGCTAGTT TAGGACTAAG TGTAAAAATT
ACCCGCCGAC TGACCAAAGA ATTTAAACGT CGCTGGGGAA TATTTGCTTA TGCTGTTACA
GCCATGCAAG TTATTTGGGA ATCTCGTCCT TTTAGTGCAG AGATTCACTC TAAAGACAGA
GTTTTTCGTA TCAAAACTGT ACAAATTGCT GTCGGAAATG GCCGCTATTA CGGCGGTGGT
ATGGCTATAG TTCCCGACGC TAGTATTGAT GACCAAAGAC TAGACCTTTA TAGTCTAGAA
ATTAGTCATT GGTGGGAAAT TATTCCCTTA TTACCTGCAA TGCGAAATGG CCGACACATT
CATCGACAAA ACGTCCGCGC CCTCAACGGC CAGGAGTTTG AAGTTTATAC ACGTAAACCC
CGTGCTATCA ATACCGATGG TGAAATCACA ACCTATACCC CCGCCACATT TCGCGTTATT
CCTAAAGCTG TAGCTGTTTT AGTTCCGCCA GTGTGA
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| Protein sequence | MSLRALLLVN RHARQGQARL LEAINHLKKF NFQLIEESTE HPKHLSQVIH KYKYQVDLVI
VGGGDGTLNA VVDALVETQL PLGILPLGTA NDLARTLGIS NSLPEACRTI AEGELRRIDL
GWVNGKHFFN VASLGLSVKI TRRLTKEFKR RWGIFAYAVT AMQVIWESRP FSAEIHSKDR
VFRIKTVQIA VGNGRYYGGG MAIVPDASID DQRLDLYSLE ISHWWEIIPL LPAMRNGRHI
HRQNVRALNG QEFEVYTRKP RAINTDGEIT TYTPATFRVI PKAVAVLVPP V
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