| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1015 |
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| Symbol | |
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| ID | 3679928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1224465 |
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| End bp | 1226660 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716351 |
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| Product | Outer membrane efflux protein |
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| Protein accession | YP_321534 |
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| Protein GI | 75907238 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0127212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGGAC AACACTTATT CTATAGTTTC TTGCCTGGTG TAACAGCAGC AGTATTGACG
ACTCAGCCAG CTGTGGCTGA AGCAATGAAA GTAAGTAGTG TACAACTTGT GCCTTCTTCT
AGTGTTGTGA CTACTCAAAA TAGTCAAACT TTGCTAGTAG ACAAAAATCA GACACAACTG
CCTAATGCTA CAGTCCAGAT TTTTCCAGAC ATCATTCCCA CTTCTGGTGT GACTACACCA
AATTTACAAT TTTCCAGTAG TCACAGTCAC CCAGTAATCT TGACAGAAAA TACTGGTATC
GATAGAGAAC AAAAATCCCG AAAAGATGAA GTTAAAAATT TCCCTCTCAA ATCTAAACTG
ACTCTTTCTC AAAGGCTAAA ACAAAAGCGT TTTCCCAGCC AACAAAAACA AATTAACTCA
GGGATTACTA AACCGAAGTT AGTAACAAAA GTAGCTTCTG CTACCTCTAC TACGCTGCTG
GCTGGACAAC AAACTTTTTC TCCGTCTTAT ATACAAAATC CTGCGCCACA GAAAAAACTG
CAAACCCAGT TACCAATGGT TTTACAGGCA ACAGCAAATC ACGTCGGCGC AGCAAAACTC
CTAAATATCA GCAGTTGCTC ACCACAAACT TGTCAACTCA CCAAGCTAAC CGGACAGCAG
ATAGCTCAGG GTAATACTAC ACAAGACCCT ACTGCTGCTC CTGTACCGGA AGAATCAACC
ATAGTAGATA TTCAAGCGCC GACAGATACT CCTGTCCAGA CGGAATCAGT ACCAGCAGAT
ACTCAGTCAC CAAGAGTTGC ACCTGTCCAG ACGGAATCAG CGCCAGTAGA GACTCAAGCA
CCTGTAGGTG CTGTAGAAGT GCCACCAAAC CTGATTCCCA ATGCCAATCC TCTGCAATTT
CCCACCAAAC CAGAAGAAGT GACACTCAAG GAGAATCAGC CGATTACCTT GACTCAGGCG
CTGGAACTGG CACGGCGGAG CAATCGGGAT TTACAAGTTT CTCTGTTGGA ACTGCAACGC
ACTCAAGCCC TGCTACGAGA AGCACAGGCA GCTTTATTAC CTAATTTATC TGTCAGTAGT
GATGTTACCC GCAGTCAGTC TGCCGGCGGT CAACTCCAGA ACGAACTGAT TAGTAAACAG
GGGGGAGTTG GCAACAACGA TGAACCTGGT ACAGCCTTTA ATAGCCAAGC ACAATTATCC
TACGACCTTT ATACTTCTGG GAGAAGGAAA GCTGCTATTC AAGAAGCTGA GGAACAAGTA
CGTTTTAATG AATTGGATGT AGAGCGTCAG TCAGAAGAAA TTCGCTTGAG CGTGACTAGA
GCATATTACG ACTTGCAACA GGCAGATGAA CAAGTCCGTA TTGCTCGGTC GGCGGTAGAA
AATGCCCAAG CTAGCTTGCG AGATGCGGAA GCCTTAGAAA GGGCTGGGGT GGGTACTAGA
TTTGATGTGC TGCGATCGCA AGTAAACTTA GCTAATAACA CCCAACAGCT AACCAATAAC
CTATCTCGGC AACAAACCAC TCGCCGTCAA CTAGCAACCC TGTTAAGCAT TCCTCAGGCG
GTAAATATCA GCGCTGCCGA CCCTGTACAA TTAGCAGGGC TGTGGAACCA ATCCCTAGAA
CAAAGCATCA TCCTCGCTTA TCAAAACCGT CCCGAATTGC ATCAGCAGTT GGCACAAAGA
AACATCAGCG AGCAACAACG TCGGCAAGCA TTAGCAACCT TGGGGCCACA AGTCAGCTTC
GTTGCTAACT ACAACTTACT GGATCAGTTT GATGATGGTG TCGGTCTGAC TGACGGTTAT
TCTGTTGGGG TGAGAGCAAC CTTAAATCTG TACGATGGTG GAGCCGCTAG AGCCAGAGCA
TCCCAAGCTA GAGCTAATAT TGCGATCGCC GAAACTCGAT TTGCTAGCCA GCGAGACCAA
GTCCGCTTCC AAGTAGAGCA GGCCTTTACC AACCAACGCT CCAACCTAGA AAACGTGCAA
ACTGCCAATG TTGCCCTAGA ACAGGCTAGA GAAGCACTGC GTCTAGCGCG GTTGCGTTTC
CAAGCTGGTG TAGGTACTCA AACAGATGTG ATTAACTCAG AAAACGACTT AACACAGGCT
GAGGGTAACA GAATCACTGC AATTCTCGAT TACAATCGTG CCTTAGCTGA ACTACAACGT
GCTGTTACTT CTAGAGCATT AATTAGTAGT CAGTAG
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| Protein sequence | MKGQHLFYSF LPGVTAAVLT TQPAVAEAMK VSSVQLVPSS SVVTTQNSQT LLVDKNQTQL
PNATVQIFPD IIPTSGVTTP NLQFSSSHSH PVILTENTGI DREQKSRKDE VKNFPLKSKL
TLSQRLKQKR FPSQQKQINS GITKPKLVTK VASATSTTLL AGQQTFSPSY IQNPAPQKKL
QTQLPMVLQA TANHVGAAKL LNISSCSPQT CQLTKLTGQQ IAQGNTTQDP TAAPVPEEST
IVDIQAPTDT PVQTESVPAD TQSPRVAPVQ TESAPVETQA PVGAVEVPPN LIPNANPLQF
PTKPEEVTLK ENQPITLTQA LELARRSNRD LQVSLLELQR TQALLREAQA ALLPNLSVSS
DVTRSQSAGG QLQNELISKQ GGVGNNDEPG TAFNSQAQLS YDLYTSGRRK AAIQEAEEQV
RFNELDVERQ SEEIRLSVTR AYYDLQQADE QVRIARSAVE NAQASLRDAE ALERAGVGTR
FDVLRSQVNL ANNTQQLTNN LSRQQTTRRQ LATLLSIPQA VNISAADPVQ LAGLWNQSLE
QSIILAYQNR PELHQQLAQR NISEQQRRQA LATLGPQVSF VANYNLLDQF DDGVGLTDGY
SVGVRATLNL YDGGAARARA SQARANIAIA ETRFASQRDQ VRFQVEQAFT NQRSNLENVQ
TANVALEQAR EALRLARLRF QAGVGTQTDV INSENDLTQA EGNRITAILD YNRALAELQR
AVTSRALISS Q
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