Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1008 |
Symbol | ruvB |
ID | 3679920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1217486 |
End bp | 1218586 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637716343 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_321527 |
Protein GI | 75907231 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000228051 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00140746 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGATCA TCTCCTCAAA AAAACAGCCC CCAGAACCCA ACGGACAGCC AAACAAGCGC CCGGAGTCAG CACCAGCCGC CCCTAAAGAG AAGGTTTTGC AACCTGAAGC TGCTATTGAT GAGCAAGGTA AGCAAGAAGA AAGTATCAGA CCACAAAAAT TCGCCGACTA CATCGGACAG AAAGACCTGA AAGACGTGCT GGACATTGCC ATCAAAGCAG CCAAGTCGCG GGGTGAAGTT TTGGATCACT TGCTACTGTA TGGCCCGCCA GGATTGGGTA AAACAACAAT GGCAATGATA TTAGCTTCGG AAATGGGAGT CAATTACAAA ATCACTAGTG CGCCCGCCTT AGAACGTCCC AGAGATATTG TCGGGCTACT AGTGAACCTC AAACCCGGTG ATATTTTATT TATTGATGAA ATCCATCGAC TTTCGCGGAT GACCGAAGAA ATTCTCTATC CGGCAATGGA AGATTACCGC TTAGATATCA CCGTGGGTAA AGGTTCCAGC GCTCGGATTC GGAGTATACC TTTGTCTAAG TTTACCTTAG TGGGGGCAAC AACCCGCGTA GGTGCCTTAA CTTCACCACT GCGCGATCGC TTCGGCTTAA TTCAAAAACT GCGCTTTTAC GAAGTTGACG AACTCAGCCA AATAGTCCTG CGGAGCGCTC AGTTACTCCA AACCCAAGTT ACCGACGACG GAGCCACAGA AATCGCCCGT CGTTCACGGG GAACACCACG TATCGCCAAT CGCTTACTTA AACGTGTCCG CGATTATGCA CAGGTAAAAT CCTGCACAGA AGTTAGCCAA AATATTGCTG CCGAAGCACT ACAGCTATTT CAAGTAGACC CATGCGGACT CGATTGGACA GACCGTCGAA TGCTCAGTGT GATTATCGAG CAATTTAACG GTGGCCCCGT AGGTTTAGAA ACAATTGCCG CCGCGACCGG AGAAGATACC CAAACAATAG AAGAAGTATA CGAACCTTAC CTGATGCAAA TTGGCTATCT CAGTCGGACT CCCCGTGGTC GCACAGCCAC CAAAGCCGCC TATAAACACA TGGGATTTAC GCCACCAAAC GAGCAGCTAT CTTTACTTTA A
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Protein sequence | MAIISSKKQP PEPNGQPNKR PESAPAAPKE KVLQPEAAID EQGKQEESIR PQKFADYIGQ KDLKDVLDIA IKAAKSRGEV LDHLLLYGPP GLGKTTMAMI LASEMGVNYK ITSAPALERP RDIVGLLVNL KPGDILFIDE IHRLSRMTEE ILYPAMEDYR LDITVGKGSS ARIRSIPLSK FTLVGATTRV GALTSPLRDR FGLIQKLRFY EVDELSQIVL RSAQLLQTQV TDDGATEIAR RSRGTPRIAN RLLKRVRDYA QVKSCTEVSQ NIAAEALQLF QVDPCGLDWT DRRMLSVIIE QFNGGPVGLE TIAAATGEDT QTIEEVYEPY LMQIGYLSRT PRGRTATKAA YKHMGFTPPN EQLSLL
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