Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0982 |
Symbol | |
ID | 3680011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1182476 |
End bp | 1183225 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637716317 |
Product | nuclease (SNase-like) |
Protein accession | YP_321501 |
Protein GI | 75907205 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000101814 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTA AAAGCAAGAT GAAGAACCAG GGTGCAGAGG GCAGGGGGCA GGGGGCAGGA AGAGAAGTCG CAAGGAGGGT TTCCCTCCGG GCGAACTTCG GGGGCAGGGG GCAGGAAGAG AAGTCGCAAG GAGGGTTTCC CTCCGGGCGA ACTTCGGGGG CAGGGGGCAG GGGGGAAAGC TTCCTTCTCT CCACCTGCAC GCTACCCTGC TCCCCGCGCT TCCCCACCTG GGTGCAAAAA CTTGCCATGT TTGCCTGTTT GTTACTGCTG GTGAGTTGTC AAGCCAAAAA CCCTGCCACA ACATCAACTC AGGTGAGGAT CGCGCGGGTG GTGAGTGGCC AGACTCTGGA AGTTGTGGGT ATGGCGGAAC AACCAAATTT AATTTCTCAA GTGCGATTAA TTGGCGTGGA TGCACCAGAT TTGCGCCAAC GTCCTTGGGG CAATCAGTCT AAGGAATTTT TAGAAAAATC CATAGGCGAT TTAGACAAAC CTGTAATGTT GGAGTTTGAT ATTGAAGCCA AAGACACAAT TGGTCGGACA TTGGCTTACG TGTGGAAAGA TGACAAGTTA TTAAATGAAC AAGTAGTTAA ACAAGGGTAT GCTTTGTTTG TAGAGCGATC GCCTAACCAC AAATACGATC AGCGTCTAGA ACGCGCCCAA CAATGGGCAA GAATCATGGG TCAAGGTATT TGGAGTCCAG ATAAACCCAT GCGTCAAACA CCTACTGAGT TTCGTCGCCT GAATCGCTAG
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Protein sequence | MKIKSKMKNQ GAEGRGQGAG REVARRVSLR ANFGGRGQEE KSQGGFPSGR TSGAGGRGES FLLSTCTLPC SPRFPTWVQK LAMFACLLLL VSCQAKNPAT TSTQVRIARV VSGQTLEVVG MAEQPNLISQ VRLIGVDAPD LRQRPWGNQS KEFLEKSIGD LDKPVMLEFD IEAKDTIGRT LAYVWKDDKL LNEQVVKQGY ALFVERSPNH KYDQRLERAQ QWARIMGQGI WSPDKPMRQT PTEFRRLNR
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