Gene Ava_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0982 
Symbol 
ID3680011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1182476 
End bp1183225 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content51% 
IMG OID637716317 
Productnuclease (SNase-like) 
Protein accessionYP_321501 
Protein GI75907205 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.01814e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA AAAGCAAGAT GAAGAACCAG GGTGCAGAGG GCAGGGGGCA GGGGGCAGGA 
AGAGAAGTCG CAAGGAGGGT TTCCCTCCGG GCGAACTTCG GGGGCAGGGG GCAGGAAGAG
AAGTCGCAAG GAGGGTTTCC CTCCGGGCGA ACTTCGGGGG CAGGGGGCAG GGGGGAAAGC
TTCCTTCTCT CCACCTGCAC GCTACCCTGC TCCCCGCGCT TCCCCACCTG GGTGCAAAAA
CTTGCCATGT TTGCCTGTTT GTTACTGCTG GTGAGTTGTC AAGCCAAAAA CCCTGCCACA
ACATCAACTC AGGTGAGGAT CGCGCGGGTG GTGAGTGGCC AGACTCTGGA AGTTGTGGGT
ATGGCGGAAC AACCAAATTT AATTTCTCAA GTGCGATTAA TTGGCGTGGA TGCACCAGAT
TTGCGCCAAC GTCCTTGGGG CAATCAGTCT AAGGAATTTT TAGAAAAATC CATAGGCGAT
TTAGACAAAC CTGTAATGTT GGAGTTTGAT ATTGAAGCCA AAGACACAAT TGGTCGGACA
TTGGCTTACG TGTGGAAAGA TGACAAGTTA TTAAATGAAC AAGTAGTTAA ACAAGGGTAT
GCTTTGTTTG TAGAGCGATC GCCTAACCAC AAATACGATC AGCGTCTAGA ACGCGCCCAA
CAATGGGCAA GAATCATGGG TCAAGGTATT TGGAGTCCAG ATAAACCCAT GCGTCAAACA
CCTACTGAGT TTCGTCGCCT GAATCGCTAG
 
Protein sequence
MKIKSKMKNQ GAEGRGQGAG REVARRVSLR ANFGGRGQEE KSQGGFPSGR TSGAGGRGES 
FLLSTCTLPC SPRFPTWVQK LAMFACLLLL VSCQAKNPAT TSTQVRIARV VSGQTLEVVG
MAEQPNLISQ VRLIGVDAPD LRQRPWGNQS KEFLEKSIGD LDKPVMLEFD IEAKDTIGRT
LAYVWKDDKL LNEQVVKQGY ALFVERSPNH KYDQRLERAQ QWARIMGQGI WSPDKPMRQT
PTEFRRLNR